Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.92□□□□□ -2.1
COL12A1Q99715 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL12A1Q99715 AC093536.2-201ENST00000565257 1406 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
COL12A1Q99715 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
COL12A1Q99715 AP000275.1-201ENST00000411943 390 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 RPS20P25-201ENST00000412447 352 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL12A1Q99715 SDCBPP3-201ENST00000419629 891 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AL591719.1-201ENST00000444669 744 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.92□□□□□ -2.1
COL12A1Q99715 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.92□□□□□ -2.1
COL12A1Q99715 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.92□□□□□ -2.1
COL12A1Q99715 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.92□□□□□ -2.1
COL12A1Q99715 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.92□□□□□ -2.1
COL12A1Q99715 AL451049.1-201ENST00000608672 497 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 AC026523.2-201ENST00000625039 7739 ntBASIC1.92□□□□□ -2.1
COL12A1Q99715 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.91□□□□□ -2.1
COL12A1Q99715 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL12A1Q99715 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL12A1Q99715 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
COL12A1Q99715 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.91□□□□□ -2.1
COL12A1Q99715 MLLT10P2-201ENST00000506434 249 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 AC117532.1-201ENST00000514638 323 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.91□□□□□ -2.1
COL12A1Q99715 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.91□□□□□ -2.1
COL12A1Q99715 AL020991.1-201ENST00000612314 373 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 AF127577.6-201ENST00000623352 2191 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL12A1Q99715 RAC1P3-201ENST00000416129 580 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 RPL23AP74-201ENST00000437246 471 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.91□□□□□ -2.1
COL12A1Q99715 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.91□□□□□ -2.1
COL12A1Q99715 HMGN2P47-201ENST00000559378 272 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 OR1S1-201ENST00000624470 978 ntBASIC1.91□□□□□ -2.1
COL12A1Q99715 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL12A1Q99715 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.91□□□□□ -2.1
COL12A1Q99715 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL12A1Q99715 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
COL12A1Q99715 Y_RNA.354-201ENST00000365448 111 ntBASIC1.9□□□□□ -2.1
COL12A1Q99715 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
COL12A1Q99715 RNU6-356P-201ENST00000384140 107 ntBASIC1.9□□□□□ -2.1
COL12A1Q99715 AC092798.1-201ENST00000458542 409 ntBASIC1.9□□□□□ -2.1
COL12A1Q99715 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.9□□□□□ -2.1
COL12A1Q99715 AC083760.1-201ENST00000589621 670 ntBASIC1.9□□□□□ -2.1
COL12A1Q99715 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.9□□□□□ -2.1
COL12A1Q99715 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.9□□□□□ -2.1
COL12A1Q99715 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL12A1Q99715 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
COL12A1Q99715 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.9□□□□□ -2.11
COL12A1Q99715 U8.10-201ENST00000384260 133 ntBASIC1.9□□□□□ -2.11
COL12A1Q99715 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL12A1Q99715 RNA5SP200-201ENST00000516360 103 ntBASIC1.9□□□□□ -2.11
COL12A1Q99715 PDCL2P2-201ENST00000533651 189 ntBASIC1.9□□□□□ -2.11
COL12A1Q99715 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.9□□□□□ -2.11
COL12A1Q99715 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.9□□□□□ -2.11
COL12A1Q99715 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.9□□□□□ -2.11
COL12A1Q99715 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL12A1Q99715 AL139811.1-201ENST00000424779 2299 ntBASIC1.9□□□□□ -2.11
COL12A1Q99715 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL12A1Q99715 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.89□□□□□ -2.11
COL12A1Q99715 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.89□□□□□ -2.11
COL12A1Q99715 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.89□□□□□ -2.11
COL12A1Q99715 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
COL12A1Q99715 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL12A1Q99715 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
COL12A1Q99715 MTATP6P11-201ENST00000428071 670 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 DYNLL1P6-201ENST00000503440 264 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.89□□□□□ -2.11
COL12A1Q99715 AC245517.5-201ENST00000611529 162 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL12A1Q99715 AL133412.1-201ENST00000380194 2992 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.89□□□□□ -2.11
COL12A1Q99715 AL445437.1-201ENST00000623157 3087 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 RNU6-1231P-201ENST00000517185 103 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.89□□□□□ -2.11
COL12A1Q99715 OR4A45P-201ENST00000529954 901 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.89□□□□□ -2.11
COL12A1Q99715 AL356266.1-201ENST00000623311 483 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 AC091953.2-201ENST00000623979 160 ntBASIC1.89□□□□□ -2.11
COL12A1Q99715 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL12A1Q99715 AL355379.1-201ENST00000405542 640 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.88□□□□□ -2.11
COL12A1Q99715 LINC00888-204ENST00000487386 421 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 RPL23AP63-201ENST00000498752 471 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.88□□□□□ -2.11
COL12A1Q99715 AL122125.1-201ENST00000616999 600 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AP005901.5-201ENST00000545779 1796 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL12A1Q99715 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL12A1Q99715 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL12A1Q99715 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.88□□□□□ -2.11
COL12A1Q99715 Y_RNA.191-201ENST00000363972 113 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 RNA5SP210-201ENST00000391034 120 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AC092427.1-202ENST00000430569 476 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 CACYBPP1-201ENST00000438592 684 ntBASIC1.88□□□□□ -2.11
COL12A1Q99715 AL513321.1-201ENST00000441175 761 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms