Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 Y_RNA.148-201ENST00000363557 117 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 RNA5SP428-201ENST00000365129 132 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 SNORA70.6-201ENST00000383934 134 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 MIR19A-201ENST00000384878 82 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 CYB5AP4-201ENST00000396692 399 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AL139397.2-201ENST00000404529 772 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 PSMA6P3-201ENST00000428242 164 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 FABP7P2-201ENST00000429946 379 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 CBX3P6-201ENST00000430257 527 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AL359265.2-201ENST00000434367 631 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AC104073.1-201ENST00000451988 151 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 CBX1P2-201ENST00000453841 458 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 RN7SL189P-201ENST00000468631 289 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 SNORA70.11-201ENST00000515987 138 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 SNORA70.13-201ENST00000516116 138 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 RNA5SP454-201ENST00000517231 127 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AC105254.2-201ENST00000603636 436 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AL031320.1-201ENST00000604177 357 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AP001486.3-201ENST00000615334 372 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AP000843.1-201ENST00000624880 701 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 MTND5P28-201ENST00000438005 1594 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL034549.2-201ENST00000618285 3373 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL138713.1-201ENST00000624026 2130 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RPL32P3-201ENST00000359025 275 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RNA5SP443-201ENST00000363083 132 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 Y_RNA.135-201ENST00000363439 95 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RNU6-702P-201ENST00000364982 107 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 Y_RNA.378-201ENST00000365652 113 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RNU6-505P-201ENST00000384427 107 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL359643.1-201ENST00000404109 423 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RNU6-954P-201ENST00000411355 107 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 COX6B1P1-201ENST00000415962 213 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AC114482.1-201ENST00000418010 247 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 BX323845.1-201ENST00000432417 179 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RPL21P89-201ENST00000444021 467 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL118520.1-201ENST00000450770 291 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 MRPS31P2-201ENST00000451581 518 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 RPS27P27-201ENST00000498779 255 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AC006427.1-201ENST00000514359 712 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 HMGB1P41-201ENST00000520234 440 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AC008033.2-201ENST00000542626 177 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL118558.2-201ENST00000556294 238 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL670379.11-201ENST00000604059 253 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL670379.10-201ENST00000604330 253 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL670379.12-201ENST00000605291 253 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL670379.9-201ENST00000605428 253 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 MIR6820-201ENST00000611508 62 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 AL390240.1-201ENST00000612950 384 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 Z69720.2-201ENST00000624755 279 ntBASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC85AQ96PX6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 AC083899.1-201ENST00000454465 3819 ntBASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC85AQ96PX6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC85AQ96PX6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms