Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC103710.4-201ENST00000609301 899 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC012360.2-201ENST00000609349 391 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 AC013412.1-201ENST00000610687 192 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX27Q96L92 AC092140.2-201ENST00000618027 521 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SNX27Q96L92 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 AL356473.1-201ENST00000406203 1408 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX27Q96L92 PABPC1P9-201ENST00000426076 1612 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 ZNF33CP-201ENST00000432492 2030 ntBASIC4.53□□□□□ -1.68
SNX27Q96L92 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX27Q96L92 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SNX27Q96L92 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SNX27Q96L92 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.69
SNX27Q96L92 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX27Q96L92 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX27Q96L92 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC067945.1-201ENST00000342609 618 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 U3.4-201ENST00000363352 213 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RNU5F-7P-201ENST00000363696 115 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 MIR183-201ENST00000384958 110 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RNA5SP247-201ENST00000411181 105 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC012065.2-201ENST00000421295 375 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 SRIP2-201ENST00000428470 166 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 LSM1P1-201ENST00000438629 273 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 HMGB1P18-201ENST00000438801 619 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX27Q96L92 TRIM60P18-201ENST00000441518 828 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 MTCO2P7-201ENST00000446518 666 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 EPS15P1-201ENST00000448836 336 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 PAXBP1P1-201ENST00000449315 447 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 BX322784.1-201ENST00000455793 1077 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RPL21P8-201ENST00000465083 535 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RPL31P50-201ENST00000471002 296 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RAP1BP2-201ENST00000478270 544 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX27Q96L92 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC025445.1-201ENST00000502728 300 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC109458.1-201ENST00000508858 316 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC093809.1-201ENST00000509155 340 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 IGKV2D-36-201ENST00000518643 226 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AL139174.1-201ENST00000531489 886 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX27Q96L92 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX27Q96L92 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX27Q96L92 BNIP3P23-201ENST00000599655 511 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AC073544.2-201ENST00000601155 540 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RN7SKP299-201ENST00000606679 301 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX27Q96L92 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX27Q96L92 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SNX27Q96L92 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX27Q96L92 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX27Q96L92 AL390237.1-201ENST00000404226 1415 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 AL035425.3-201ENST00000564206 4996 ntBASIC4.52□□□□□ -1.69
SNX27Q96L92 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX27Q96L92 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX27Q96L92 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX27Q96L92 ZNF734P-201ENST00000419494 1534 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNX27Q96L92 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.51□□□□□ -1.69
SNX27Q96L92 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SNX27Q96L92 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.51□□□□□ -1.69
SNX27Q96L92 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNX27Q96L92 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SNX27Q96L92 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SNX27Q96L92 RNU6-730P-201ENST00000383954 104 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 SNORA70E-201ENST00000384492 135 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 MIR128-1-201ENST00000384921 82 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.51□□□□□ -1.69
SNX27Q96L92 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNX27Q96L92 AC108032.1-201ENST00000416706 207 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 AP000907.1-201ENST00000428428 510 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 AL365184.2-201ENST00000431139 435 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 PRELID3BP10-201ENST00000431957 584 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.51□□□□□ -1.69
SNX27Q96L92 COX6CP2-201ENST00000444980 225 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 MTCO1P27-201ENST00000448269 226 ntBASIC4.51□□□□□ -1.69
SNX27Q96L92 AC087312.1-201ENST00000471411 480 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms