Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 SYF2P2-201ENST00000417620 583 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL513174.1-201ENST00000423182 629 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 RPL7P36-201ENST00000444633 681 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 SNORA59A-201ENST00000459326 152 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 HMGB1P36-201ENST00000487709 576 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC034222.1-201ENST00000494052 532 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 OR5H5P-201ENST00000503164 928 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC026427.2-201ENST00000506228 536 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC090615.1-201ENST00000577519 154 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL353997.4-201ENST00000586196 166 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC115621.1-201ENST00000604653 858 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 BCRP9-201ENST00000605312 388 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AP003117.2-201ENST00000606010 545 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC015540.1-201ENST00000615828 501 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC026585.1-201ENST00000619582 524 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC015967.1-201ENST00000619893 476 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 MIR6715B-201ENST00000637172 77 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 TEX21P-201ENST00000447107 1476 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.53□□□□□ -1.69
TRIM43Q96BQ3 AC126323.6-202ENST00000568092 3511 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RNU6-1042P-201ENST00000384204 107 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RN7SKP177-201ENST00000410567 355 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RNU2-15P-201ENST00000410692 191 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 HMGN1P14-201ENST00000412459 517 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RPS24P1-201ENST00000438550 371 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC006011.1-201ENST00000442758 349 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 ELOCP30-201ENST00000447108 299 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 PRDX3P3-201ENST00000447765 522 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC007967.1-201ENST00000455422 1159 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 BTF3P5-201ENST00000457252 467 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RPS20P24-201ENST00000457473 361 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 CDC42P4-201ENST00000510507 563 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 MTCO3P44-201ENST00000510977 541 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RNU6-352P-201ENST00000516908 107 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 OR8L1P-201ENST00000534005 955 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 ZNF519P3-201ENST00000557158 1032 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 RPL23AP97-201ENST00000568955 471 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 MIR5697-201ENST00000578045 78 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 MIR4298-201ENST00000584380 73 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 BNIP3P8-201ENST00000597863 560 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AL355812.1-201ENST00000603215 216 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC010201.1-201ENST00000605051 540 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC091965.4-201ENST00000607691 587 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 OR6R2P-201ENST00000609216 300 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC138932.5-201ENST00000617759 563 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC099842.1-201ENST00000619919 596 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AL359740.1-201ENST00000624340 592 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 AL359893.1-201ENST00000447628 1580 ntBASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM43Q96BQ3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM43Q96BQ3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms