Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 MTCO1P27-201ENST00000448269 226 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 EPS15P1-201ENST00000448836 336 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 SUMO2P2-201ENST00000456482 255 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AL024509.2-201ENST00000493462 493 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 OR2A20P-203ENST00000498397 1268 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC105313.1-201ENST00000509121 353 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 MTND5P13-201ENST00000513046 1079 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 MTCO2P32-201ENST00000514865 403 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 IGKV2-23-201ENST00000518729 323 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC106038.2-201ENST00000520706 568 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC009101.1-201ENST00000568135 242 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 CYP4A43P-201ENST00000568156 121 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC053481.3-201ENST00000577881 843 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AP005136.1-201ENST00000579765 429 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 U73023.1-201ENST00000603134 700 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AL022161.1-201ENST00000604390 213 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AL591034.3-201ENST00000605511 685 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC080013.6-201ENST00000606185 215 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AL031775.1-201ENST00000607014 887 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC018755.4-201ENST00000619715 454 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC103858.2-201ENST00000621471 543 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AL161637.1-201ENST00000622380 412 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AP003399.1-201ENST00000637534 361 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 AC097714.1-201ENST00000511272 1647 ntBASIC4.13□□□□□ -1.75
SH3KBP1Q96B97 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 MIR23A-201ENST00000385245 73 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 RNU6-821P-201ENST00000390995 107 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AP000567.1-201ENST00000406413 156 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 MIR1179-201ENST00000408703 91 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 RPL23AP39-201ENST00000415533 405 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC016907.1-201ENST00000419483 435 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 MTCO2P5-201ENST00000422621 426 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AP000936.2-201ENST00000447151 681 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 RPL7P52-201ENST00000449200 742 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 HMGB1P15-201ENST00000453854 435 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AP001992.1-205ENST00000462248 379 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 SLC25A15P5-201ENST00000508033 253 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC093677.1-201ENST00000514414 678 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC093853.1-201ENST00000515689 483 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC060788.1-201ENST00000521318 469 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC023161.2-201ENST00000551218 780 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC110741.2-201ENST00000605278 268 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AL031666.3-201ENST00000609320 1006 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AC007546.1-201ENST00000619452 559 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 AL445363.3-201ENST00000623080 671 ntBASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SH3KBP1Q96B97 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC002546.1-201ENST00000588041 2504 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNA5SP317-201ENST00000410176 116 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNU6-628P-201ENST00000410675 107 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNA5SP311-201ENST00000411290 116 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC006548.1-201ENST00000427470 102 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms