Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC005962.2-201ENST00000611427 652 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL360181.4-201ENST00000621752 134 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AP003485.2-201ENST00000623636 610 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFT1Q96AA3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFT1Q96AA3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 TAS2R15P-201ENST00000390674 928 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL031679.1-201ENST00000400616 525 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL590704.1-201ENST00000402856 794 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 MTND1P32-201ENST00000433043 938 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL353691.1-201ENST00000451332 387 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFT1Q96AA3 RPL31P50-201ENST00000471002 296 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 ST13P14-201ENST00000474095 734 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AP000563.1-201ENST00000490865 758 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC008489.1-201ENST00000524271 483 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AP003730.1-201ENST00000524605 285 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 UBTFL10-201ENST00000528532 562 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC091516.1-201ENST00000549191 703 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 SYF2P1-201ENST00000550658 413 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 MIR5186-201ENST00000577504 120 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC025588.2-201ENST00000604851 466 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL390208.1-201ENST00000605885 644 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 MIR6820-201ENST00000611508 62 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 AL445567.2-201ENST00000618935 498 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC015967.1-201ENST00000619893 476 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFT1Q96AA3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.35□□□□□ -1.87
RFT1Q96AA3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFT1Q96AA3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RFT1Q96AA3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 SNORD113-6-201ENST00000363345 75 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 RNU1-32P-201ENST00000363937 159 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 RNU6-343P-201ENST00000364709 104 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 RNU6-283P-201ENST00000364788 107 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 RNU6-757P-201ENST00000410334 100 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AL008987.1-201ENST00000415528 237 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC006960.1-201ENST00000419980 153 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 DUTP6-201ENST00000425573 462 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 RPL18P10-201ENST00000425606 538 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 SETP8-201ENST00000435341 628 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 SDCBPP1-201ENST00000440192 890 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 RSL24D1P3-201ENST00000449255 495 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 RPS4XP10-201ENST00000465034 731 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC023424.2-201ENST00000493479 777 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 PCBP2P3-201ENST00000509726 843 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC010265.1-201ENST00000513509 211 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 COX6CP8-201ENST00000522620 226 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 OR4T1P-201ENST00000554933 911 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC009097.3-201ENST00000563557 1018 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 MIR3939-201ENST00000582614 106 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms