Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC015908.5-201ENST00000623289 343 ntBASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 AC068880.5-201ENST00000624331 290 ntBASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 AC244258.1-201ENST00000637553 1071 ntBASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 MFSD8-216ENST00000641147 4009 ntBASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4AQ8WYN0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 MARK2P15-201ENST00000432204 2186 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 GNG5P1-201ENST00000255500 204 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RNU1-14P-201ENST00000362759 152 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RNU6-878P-201ENST00000384578 110 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 CIR1P3-201ENST00000405137 479 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RPL31P2-201ENST00000413849 377 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 BX295541.1-201ENST00000417774 250 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RPS15AP40-201ENST00000419621 391 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AL590233.1-201ENST00000430017 456 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RPL12P46-201ENST00000436610 195 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC122718.1-201ENST00000439448 744 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 SDCBPP1-201ENST00000440192 890 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 MTATP6P30-201ENST00000443540 664 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 HMGB1P15-201ENST00000453854 435 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 FAM133DP-201ENST00000464802 691 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AL672167.3-201ENST00000465951 960 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC146507.1-201ENST00000468335 354 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AL121769.1-201ENST00000469473 401 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AF213884.1-201ENST00000488102 463 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RN7SL691P-201ENST00000494487 301 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC116353.2-201ENST00000505332 712 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC093677.1-201ENST00000514414 678 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RNU2-46P-201ENST00000517038 113 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RNU6-201P-201ENST00000517100 61 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 CDH12P4-201ENST00000517835 295 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 CDH12P3-201ENST00000517935 295 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 CDH12P1-201ENST00000518435 295 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 RPS3AP4-201ENST00000555161 764 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 FAM157B-203ENST00000639350 358 ntBASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4AQ8WYN0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RNU4-12P-201ENST00000365233 139 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 SNORD82-201ENST00000365530 70 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 USP9YP36-201ENST00000424581 829 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC233728.2-201ENST00000425348 757 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AL358934.1-201ENST00000432346 324 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC000111.3-201ENST00000433478 193 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 MTND4LP10-201ENST00000435146 291 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 ARPC3P1-201ENST00000437218 533 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC013267.1-201ENST00000458227 267 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 HMGB1P29-201ENST00000505659 499 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RNA5SP49-201ENST00000516450 115 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RNA5SP73-201ENST00000516744 108 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RN7SKP92-201ENST00000517266 244 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 CENPUP2-201ENST00000555897 1186 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 DUXAP4-201ENST00000603046 613 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RNU6-87P-201ENST00000607561 108 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC092954.2-201ENST00000609103 430 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC007014.2-201ENST00000615581 479 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 MIR6863-201ENST00000636112 90 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms