Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC008716.1-201ENST00000511084 513 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 SNORA14.1-201ENST00000516113 141 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-397P-201ENST00000516226 104 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-346P-201ENST00000516288 111 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC024619.4-201ENST00000580924 316 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC060771.1-201ENST00000582031 164 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 VN1R91P-201ENST00000594377 169 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC008687.2-201ENST00000597865 520 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC064801.1-201ENST00000612025 407 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 MIR8080-201ENST00000622224 89 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AP000843.1-201ENST00000624880 701 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC023421.1-201ENST00000590535 1785 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC007114.2-201ENST00000576014 4281 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 PWAR1-201ENST00000624188 2414 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC018809.2-201ENST00000602436 3823 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 ZNF72P-201ENST00000425869 1908 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-28P-201ENST00000362378 107 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 SNORA16A-201ENST00000384342 137 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 SNORA51.11-201ENST00000384442 131 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-1127P-201ENST00000384580 107 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-1156P-201ENST00000410365 100 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RPL21P38-201ENST00000418090 167 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 CRIP1P1-201ENST00000427567 185 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 MRPS21P3-201ENST00000436696 262 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RPL29P29-201ENST00000448725 423 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 NDUFB4P10-201ENST00000452541 359 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 DYNLL1P5-201ENST00000467158 270 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RPL7AP6-201ENST00000477943 801 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 RN7SL570P-201ENST00000484405 292 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AL133481.2-203ENST00000607558 139 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AL353662.3-201ENST00000625131 237 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 CDRT1-208ENST00000630868 794 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 AC007938.2-201ENST00000604666 2634 ntBASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.7□□□□□ -1.34
NKX2-3Q8TAU0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC103710.2-202ENST00000641454 2853 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.399-201ENST00000383955 105 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-842P-201ENST00000384269 107 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-306P-201ENST00000384617 107 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.576-201ENST00000384781 102 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AL445189.1-201ENST00000405722 338 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RPL21P112-201ENST00000434403 463 ntBASIC6.69□□□□□ -1.34
NKX2-3Q8TAU0 RPL21P89-201ENST00000444021 467 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms