Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 RNU2-43P-201ENST00000410306 190 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 TBCAP2-201ENST00000416175 326 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 MTATP6P18-201ENST00000417994 673 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 RGS17P1-201ENST00000423358 553 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 MTND1P2-201ENST00000430604 821 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 BTF3P10-201ENST00000433415 495 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 RPL7P54-201ENST00000438336 674 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 HMGB3P12-201ENST00000438745 556 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL138799.3-201ENST00000438968 350 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL662791.1-201ENST00000441992 928 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL353572.1-201ENST00000442490 417 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC006480.1-201ENST00000449887 378 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 RPL7P23-201ENST00000493874 747 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 ARL4AP2-201ENST00000507378 601 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC093840.1-201ENST00000511599 336 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 RNU6-390P-201ENST00000516259 103 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 SCARNA24.1-201ENST00000516465 137 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 RNU6-410P-201ENST00000517006 107 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC134698.4-201ENST00000523451 826 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 FAM60DP-201ENST00000524174 632 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 DEFB109D-201ENST00000529497 240 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 OR4R1P-201ENST00000529879 463 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AK6P1-201ENST00000540219 478 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC133555.2-201ENST00000550213 292 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC074050.1-201ENST00000563247 211 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 SNORA59B-202ENST00000578183 701 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL121932.1-201ENST00000605542 214 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC008966.2-201ENST00000606157 453 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AL450472.3-201ENST00000615578 367 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 BX005214.3-202ENST00000619809 325 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC243312.2-201ENST00000623340 601 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 MIR3688-2-201ENST00000636963 87 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 AC108751.5-201ENST00000492880 1336 ntBASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNPOQ8N3V7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 AL136964.1-201ENST00000622038 2990 ntBASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.9□□□□□ -1.62
SYNPOQ8N3V7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 SNORA73.1-201ENST00000363107 205 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 RNA5SP447-201ENST00000363749 119 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 U3.11-201ENST00000364476 212 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 U3.22-201ENST00000391120 215 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AL109755.1-201ENST00000401791 649 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 CIR1P3-201ENST00000405137 479 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 RPL21P24-201ENST00000413752 448 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC099677.1-201ENST00000420575 175 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 UQCRBP1-201ENST00000421129 336 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC244098.2-201ENST00000422068 99 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 MTCO1P20-201ENST00000425366 358 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 RPL23AP20-201ENST00000447965 421 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC000111.2-201ENST00000448200 210 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 RPS11P1-201ENST00000451072 473 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC023598.1-201ENST00000472521 361 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 RNU6-1178P-201ENST00000516674 107 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC105233.3-201ENST00000531125 744 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC128657.1-201ENST00000549459 145 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 RPL12P25-202ENST00000598100 674 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC007363.1-201ENST00000604736 620 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC093838.1-201ENST00000613014 469 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AL603758.1-201ENST00000618654 241 ntBASIC4.9□□□□□ -1.63
SYNPOQ8N3V7 AC068831.8-201ENST00000620171 435 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms