Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC087369.1-201ENST00000520775 996 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AP005902.1-201ENST00000521358 186 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC027544.3-201ENST00000535082 757 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 MIR132-201ENST00000591554 101 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC012368.3-201ENST00000604190 219 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 Z98751.3-201ENST00000604447 521 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 MIR7159-201ENST00000620587 66 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC089999.3-201ENST00000622440 577 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AP001052.1-201ENST00000626421 99 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC239868.2-201ENST00000564237 4527 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC005183.1-201ENST00000603687 1979 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AL139811.1-201ENST00000424779 2299 ntBASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.71□□□□□ -1.5
DEPDC4Q8N2C3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 RNU1-65P-201ENST00000363919 148 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 RHOT1P2-201ENST00000366423 333 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-76P-201ENST00000384060 104 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 MIR517A-201ENST00000385001 87 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AL133482.1-201ENST00000415988 498 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AL138785.1-201ENST00000425821 331 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AL354707.3-201ENST00000427308 331 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 RPS11P1-201ENST00000451072 473 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 RPS23P3-201ENST00000470993 430 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC113367.2-201ENST00000505749 160 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 MIR3154-201ENST00000577829 84 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 RN7SL753P-201ENST00000581238 290 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC016727.2-201ENST00000603988 621 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 ELOCP5-201ENST00000604924 333 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 SNORD96A-201ENST00000606577 79 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC062037.2-201ENST00000610137 73 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 AC091812.1-201ENST00000432235 1948 ntBASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.7□□□□□ -1.5
DEPDC4Q8N2C3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-288P-201ENST00000363690 104 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-379P-201ENST00000363813 104 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 Y_RNA.424-201ENST00000384063 103 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-882P-201ENST00000391025 103 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AL139805.1-201ENST00000407837 289 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC096664.2-201ENST00000411843 406 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 BX842559.1-201ENST00000419615 532 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 RNU7-187P-201ENST00000458985 68 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC018638.3-201ENST00000461273 132 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC091180.1-201ENST00000462104 372 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-120P-201ENST00000516077 103 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 SNORA31.22-201ENST00000517204 135 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 CYCSP25-201ENST00000525280 316 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AP000827.1-201ENST00000527814 258 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 RPA2P1-201ENST00000556557 721 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 AC084783.1-201ENST00000565846 910 ntBASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.69□□□□□ -1.5
DEPDC4Q8N2C3 SNORD58B-201ENST00000607313 66 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms