Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 CFL1P1-202ENST00000432948 411 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC011816.1-201ENST00000441346 546 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 MTND4LP30-201ENST00000454092 297 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AL353752.1-201ENST00000454946 260 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 PRELID3BP1-201ENST00000457142 540 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RPL21P93-201ENST00000480465 489 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RPL7P6-201ENST00000480903 738 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC022447.4-201ENST00000504053 364 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC116337.1-201ENST00000509680 687 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RNU6-488P-201ENST00000515918 99 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 IGHV3-76-201ENST00000522465 295 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RN7SL356P-201ENST00000582228 248 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC096772.1-201ENST00000609146 564 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 ATP5A1P2-202ENST00000616464 443 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC103858.2-201ENST00000621471 543 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC244100.1-202ENST00000621554 382 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 MIR6719-201ENST00000622428 87 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 CDRT1-208ENST00000630868 794 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AL512643.1-201ENST00000635735 524 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC002525.1-201ENST00000624392 1622 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RNU6-28P-201ENST00000362378 107 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 MIR143-201ENST00000385300 106 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RNU2-23P-201ENST00000410545 195 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL590135.1-201ENST00000422215 156 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL355433.1-201ENST00000422804 300 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 SRSF1P1-201ENST00000424058 520 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RPL7AP49-201ENST00000429522 581 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 SNAP23P1-201ENST00000433229 246 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL591438.1-201ENST00000433508 581 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RPL23AP74-201ENST00000437246 471 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RPL23AP43-201ENST00000446445 471 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL031584.1-201ENST00000447169 754 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC090804.1-201ENST00000448870 490 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 HMGN3P1-201ENST00000453847 193 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RPS3AP41-201ENST00000462701 778 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL133445.1-201ENST00000467051 452 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC092754.1-201ENST00000472975 479 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 TXNP6-201ENST00000510190 310 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC018797.3-201ENST00000513388 1241 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 SCARNA16.4-201ENST00000516956 187 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AL137161.1-201ENST00000532231 390 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 HSBP1P1-201ENST00000555205 166 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC015720.2-201ENST00000567709 334 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms