Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RPS15AP10-201ENST00000432472 382 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 LINC02210-201ENST00000444561 288 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AL596266.1-201ENST00000448132 400 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RN7SL197P-201ENST00000466981 299 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 DYNLL1P5-201ENST00000467158 270 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RN7SL51P-201ENST00000468230 285 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AL136126.1-201ENST00000473603 402 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RN7SL97P-201ENST00000486780 299 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC104057.1-201ENST00000515547 497 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 IGHV3-76-201ENST00000522465 295 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 MIR3128-201ENST00000581957 66 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 MIR6133-201ENST00000617057 108 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC103858.2-201ENST00000621471 543 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC103710.2-202ENST00000641454 2853 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC018809.2-201ENST00000602436 3823 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 MTND5P6-201ENST00000422338 1798 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 OR4F13P-202ENST00000560066 2054 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-746P-201ENST00000384112 109 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-472P-201ENST00000384299 107 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-1127P-201ENST00000384580 107 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 MIR1252-201ENST00000408861 65 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 Z99755.1-201ENST00000414048 380 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RPL23AP69-201ENST00000431134 458 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC092162.1-201ENST00000432828 434 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 MTND5P15-201ENST00000434246 349 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC133473.1-201ENST00000455173 299 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC112492.4-201ENST00000456549 352 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RPL36AP13-201ENST00000457490 317 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RPS3AP41-201ENST00000462701 778 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RPS23P3-201ENST00000470993 430 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RPS18P6-201ENST00000476880 458 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC093815.1-201ENST00000508637 280 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC108078.2-201ENST00000510750 236 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC021146.3-201ENST00000511911 260 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-1023P-201ENST00000516137 106 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-1332P-201ENST00000516666 104 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 RNU4-77P-201ENST00000516692 156 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC022868.1-201ENST00000517767 391 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC122688.1-201ENST00000541494 223 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 MIR5692C1-201ENST00000585309 91 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 IGHV3-29-201ENST00000604817 344 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC023813.4-201ENST00000607580 580 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AL590099.1-201ENST00000615276 138 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AL136313.1-201ENST00000624804 202 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC233263.6-201ENST00000631132 1963 ntBASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SH3RF1Q7Z6J0 AC068870.1-201ENST00000563737 2455 ntBASIC6.34□□□□□ -1.4
SH3RF1Q7Z6J0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SH3RF1Q7Z6J0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
SH3RF1Q7Z6J0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SH3RF1Q7Z6J0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AL731566.1-201ENST00000620490 1937 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AL359854.1-201ENST00000614203 1594 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 RN7SKP145-201ENST00000363291 303 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 RN7SKP103-201ENST00000363848 320 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD14.1-201ENST00000365609 90 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-1226P-201ENST00000384317 107 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 RNU1-106P-201ENST00000384382 164 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 MTCO3P19-201ENST00000415864 321 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms