Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC010620.1-201ENST00000601088 1102 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC115621.1-201ENST00000604653 858 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC010680.4-201ENST00000605334 543 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC064807.4-201ENST00000607201 407 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC012531.5-201ENST00000611375 151 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 AC079684.1-201ENST00000621405 437 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 GDI2P1-201ENST00000429312 1336 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.38□□□□□ -1.71
SYNE3Q6ZMZ3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 RNU6-253P-201ENST00000384730 105 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 Z99497.1-201ENST00000421282 135 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 BMS1P19-201ENST00000433925 393 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 RPL23AP74-201ENST00000437246 471 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC073387.1-201ENST00000453261 709 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 HMGN2P7-201ENST00000456186 273 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC239860.2-201ENST00000525886 270 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 BNIP3P5-201ENST00000562290 498 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 MIR3915-201ENST00000578518 97 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 MIR5187-201ENST00000583479 76 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC080013.4-201ENST00000607624 649 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AC009090.3-201ENST00000616553 565 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 CYP3A51P-201ENST00000633513 256 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 MIR4496-201ENST00000635896 61 ntBASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNE3Q6ZMZ3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 RNU1-18P-201ENST00000363062 164 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 SNORA70E-201ENST00000384492 135 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AL590704.1-201ENST00000402856 794 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 MIR1302-8-201ENST00000408342 128 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC092017.2-201ENST00000427600 362 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 ZYG11AP1-201ENST00000430329 837 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 MTND1P20-201ENST00000430341 950 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 RNU7-136P-201ENST00000458819 69 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AL133162.1-201ENST00000463228 453 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC109486.1-201ENST00000486833 374 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC090453.1-201ENST00000495560 436 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AP005136.1-201ENST00000579765 429 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AP001180.3-201ENST00000582221 145 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AL020997.2-201ENST00000602607 184 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 RNU6-88P-201ENST00000606801 100 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 MIR7844-201ENST00000616161 122 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AF246928.1-201ENST00000623768 87 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC231657.1-201ENST00000624313 397 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC079228.1-201ENST00000624774 1049 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 AP002907.1-201ENST00000606361 1430 ntBASIC4.36□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms