Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 Z99127.3-201ENST00000448158 395 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 MTND1P12-201ENST00000455231 147 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC108059.3-201ENST00000456388 214 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 RNU7-59P-201ENST00000459101 61 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC007182.2-201ENST00000489251 402 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 HIGD1AP14-201ENST00000507617 282 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 FTH1P9-201ENST00000513251 355 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC010493.1-201ENST00000513479 292 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC026801.2-201ENST00000515352 425 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 BNIP3P33-201ENST00000598912 569 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC013244.1-201ENST00000604279 193 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC092954.2-201ENST00000609103 430 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 uc_338.12-201ENST00000616344 181 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC019226.1-201ENST00000625666 515 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 CYP4F35P-202ENST00000636121 390 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC138649.5-201ENST00000637456 137 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC074101.1-201ENST00000637861 241 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 C4BPAP1-201ENST00000415474 1893 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 PABPC1P6-201ENST00000445594 1829 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 ZNF962P-201ENST00000443465 3140 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 A2MP1-204ENST00000566278 4130 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 Y_RNA.1-201ENST00000352915 104 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RNY1P12-201ENST00000364251 105 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 SNORA2.3-201ENST00000383920 135 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 MIR223-201ENST00000385204 110 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RNA5SP339-201ENST00000390987 122 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 MTCO3P40-201ENST00000392516 676 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RPL7P60-201ENST00000397636 735 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 CALM2P3-201ENST00000400429 449 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RN7SKP167-201ENST00000411047 285 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 MTND1P21-201ENST00000412991 285 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 UBE2FP1-201ENST00000416536 447 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 EIF1P1-201ENST00000421436 341 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC073464.1-201ENST00000429823 534 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC002486.1-201ENST00000435098 391 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 HMGN2P21-201ENST00000447764 270 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AL136380.1-201ENST00000447970 162 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RPS11P1-201ENST00000451072 473 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 NANOGP10-201ENST00000453325 895 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RN7SL172P-201ENST00000460535 303 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC126182.1-201ENST00000478134 357 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RPS15AP36-201ENST00000492022 382 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC078817.1-201ENST00000492623 435 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RPL7P23-201ENST00000493874 747 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC024558.1-201ENST00000505008 528 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC011352.1-201ENST00000512300 793 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 SNORA31.20-201ENST00000517111 133 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC008489.1-201ENST00000524271 483 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC126177.5-201ENST00000549599 178 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 SUB1P2-201ENST00000556401 297 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC009117.1-201ENST00000563948 554 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC209154.1-201ENST00000582156 337 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms