Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AL355812.1-201ENST00000603215 216 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC011626.1-201ENST00000604710 562 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 HMGN2P28-201ENST00000606102 262 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC141002.1-201ENST00000607025 279 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 U6.104-201ENST00000637979 90 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MROH3P-201ENST00000435735 2676 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 INTS6P1-201ENST00000504674 2530 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 HSPA8P4-201ENST00000511877 1920 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 CLCA3P-203ENST00000490028 2781 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC022893.2-201ENST00000564832 3296 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 ZNF402P-201ENST00000404435 3100 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC138393.1-203ENST00000327086 343 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 SNORA20.1-201ENST00000364790 130 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AL359837.1-201ENST00000381357 287 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RNU6-339P-201ENST00000384310 107 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RPL21P1-201ENST00000399532 476 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC097374.1-203ENST00000400783 485 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 MIR541-201ENST00000401360 84 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 DUTP5-201ENST00000406790 469 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RPL30P3-201ENST00000424262 333 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 UBE2V1P4-201ENST00000425374 344 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 CYCSP43-201ENST00000438233 310 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 NUTF2P7-201ENST00000453086 375 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 SNORD127-201ENST00000458892 86 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RNU7-187P-201ENST00000458985 68 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RPL12P20-201ENST00000475538 479 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RNU6-677P-201ENST00000516914 101 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC131009.3-201ENST00000621809 287 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 AC009229.4-201ENST00000623854 1947 ntBASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRPF38BQ5VTL8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PRPF38BQ5VTL8 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 Y_RNA.151-201ENST00000363566 112 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 RNA5SP505-201ENST00000364748 108 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 RNU1-43P-201ENST00000365052 165 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 SNORA67-201ENST00000384423 137 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC092809.3-201ENST00000415453 231 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 snoU109.4-201ENST00000458953 143 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC018437.1-201ENST00000492214 406 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC040926.1-201ENST00000530195 238 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC009120.3-201ENST00000563335 499 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 MIR3160-1-201ENST00000577972 85 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 MIR5095-201ENST00000578844 88 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC119403.2-201ENST00000590960 598 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC012119.1-201ENST00000603184 222 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC174048.1-201ENST00000603389 144 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AL034351.1-201ENST00000605288 668 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AL355810.1-201ENST00000614629 552 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 MIR7703-201ENST00000620784 77 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 AC097461.1-201ENST00000568928 2821 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms