Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX1Q15475 RNA5SP217-201ENST00000515959 91 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 RNU6-1261P-201ENST00000517194 104 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX1Q15475 DUXAP2-201ENST00000519198 589 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX1Q15475 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX1Q15475 AC022790.1-201ENST00000522872 204 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX1Q15475 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX1Q15475 UBTFL10-201ENST00000528532 562 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.38□□□□□ -1.87
SIX1Q15475 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX1Q15475 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX1Q15475 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX1Q15475 MTCYBP28-201ENST00000566728 1132 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC138915.2-201ENST00000569776 97 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX1Q15475 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX1Q15475 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SIX1Q15475 MIR3922-201ENST00000585192 84 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.38□□□□□ -1.87
SIX1Q15475 AL357094.1-201ENST00000603845 844 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AP000484.1-201ENST00000620067 1252 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC243312.2-201ENST00000623340 601 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC004777.1-201ENST00000624317 287 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC120349.3-201ENST00000624377 529 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC098679.5-201ENST00000624394 571 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AP000776.1-201ENST00000530032 1663 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
SIX1Q15475 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX1Q15475 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.38□□□□□ -1.87
SIX1Q15475 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SIX1Q15475 MTND5P28-201ENST00000438005 1594 ntBASIC3.38□□□□□ -1.87
SIX1Q15475 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX1Q15475 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX1Q15475 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 RNU6-621P-201ENST00000364752 109 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SIX1Q15475 RNU6-157P-201ENST00000383957 107 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 RNU6-441P-201ENST00000384545 106 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 RPL7P53-201ENST00000421245 739 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AL139421.1-201ENST00000423010 169 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 RPL31P54-201ENST00000429803 370 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 FTH1P6-201ENST00000430768 320 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 MTND1P32-201ENST00000433043 938 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 RPL7P31-201ENST00000450192 724 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 RPL26P28-201ENST00000451325 435 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX1Q15475 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 AC087879.1-201ENST00000474343 374 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC006499.5-201ENST00000505037 514 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 AC109445.1-201ENST00000512356 383 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 MTCO1P30-201ENST00000515244 580 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 RN7SKP82-201ENST00000516786 223 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC245166.1-201ENST00000521012 253 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX1Q15475 MTND3P12-201ENST00000559068 328 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.37□□□□□ -1.87
SIX1Q15475 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX1Q15475 AC009220.3-201ENST00000604318 586 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 HSPE1P14-201ENST00000605812 302 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC113194.1-201ENST00000606037 500 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC091946.2-201ENST00000606105 291 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC121761.2-201ENST00000617300 689 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 Z99129.2-201ENST00000619967 314 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AC018816.2-201ENST00000621460 353 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 AC019226.2-201ENST00000625973 424 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.37□□□□□ -1.87
SIX1Q15475 SAGE4P-201ENST00000442271 3381 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.37□□□□□ -1.87
SIX1Q15475 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 AC107982.1-201ENST00000507171 1300 ntBASIC3.37□□□□□ -1.87
SIX1Q15475 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SIX1Q15475 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX1Q15475 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX1Q15475 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX1Q15475 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX1Q15475 AC117529.2-201ENST00000512159 2068 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC011978.2-201ENST00000569835 2054 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX1Q15475 SNORD46.1-201ENST00000364139 104 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX1Q15475 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.36□□□□□ -1.87
SIX1Q15475 RPL7P34-201ENST00000433316 712 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms