Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AP005229.2-201ENST00000609980 697 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC253576.2-201ENST00000618815 580 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC068880.4-201ENST00000623082 495 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC092608.3-201ENST00000625017 386 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCB1Q12824 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCB1Q12824 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL512646.1-201ENST00000269395 1077 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 SNORA63.3-201ENST00000362682 132 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 HSFY3P-201ENST00000444242 1191 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 SSXP4-201ENST00000451349 245 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 AL049829.1-201ENST00000465411 156 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 RPS4XP6-201ENST00000477670 797 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC092902.1-201ENST00000486999 259 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 NAMPTP2-201ENST00000505629 1115 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 MTCO3P27-201ENST00000514397 196 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 RNU6-416P-201ENST00000516265 103 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 RNU1-103P-201ENST00000516502 125 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 MTND2P26-201ENST00000528255 1029 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC095057.3-201ENST00000567102 1157 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC023824.3-201ENST00000569003 562 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 ELOCP29-201ENST00000588193 334 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC133794.1-201ENST00000602731 914 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC017104.5-201ENST00000637647 639 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 FAM157B-203ENST00000639350 358 ntBASIC3.13□□□□□ -1.91
SMARCB1Q12824 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
SMARCB1Q12824 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMARCB1Q12824 ELL2P4-201ENST00000446870 1376 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMARCB1Q12824 RNU1-101P-201ENST00000391171 127 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 RPL7P10-201ENST00000417407 739 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 PAICSP7-201ENST00000419829 962 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 RPS20P5-201ENST00000434808 360 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AL929288.2-201ENST00000446368 407 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC096576.1-201ENST00000489014 359 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 KCTD9P5-201ENST00000504141 1170 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC111000.2-201ENST00000507775 550 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC008885.2-201ENST00000509506 930 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 RNA5SP367-201ENST00000516557 118 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 IGJP1-201ENST00000522682 475 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AP000889.1-201ENST00000530968 660 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC007536.1-201ENST00000533382 349 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC074029.1-201ENST00000552531 1044 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 MIR4789-201ENST00000577469 82 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC124283.4-201ENST00000581815 456 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC090616.5-202ENST00000582111 297 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC112503.2-201ENST00000609005 552 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC084824.5-201ENST00000612009 413 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMARCB1Q12824 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.12□□□□□ -1.91
SMARCB1Q12824 AC011978.2-201ENST00000569835 2054 ntBASIC3.12□□□□□ -1.91
SMARCB1Q12824 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCB1Q12824 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCB1Q12824 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCB1Q12824 AL122016.1-201ENST00000403365 367 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AL355379.1-201ENST00000405542 640 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 RNU6-77P-201ENST00000410554 91 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 NUP35P2-201ENST00000416748 943 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC244098.2-201ENST00000422068 99 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 YWHAZP7-201ENST00000436906 631 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC000041.1-201ENST00000439655 175 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AC093156.1-201ENST00000440382 670 ntBASIC3.11□□□□□ -1.91
SMARCB1Q12824 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms