Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC012507.3-201ENST00000603556 477 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC067959.1-201ENST00000604334 379 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AC017083.3-201ENST00000609955 700 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AL159972.1-201ENST00000625150 448 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.21□□□□□ -1.58
SSRP1Q08945 AC006971.1-201ENST00000407916 4486 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 AL139811.1-201ENST00000424779 2299 ntBASIC5.21□□□□□ -1.58
SSRP1Q08945 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSRP1Q08945 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SSRP1Q08945 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SSRP1Q08945 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.2□□□□□ -1.58
SSRP1Q08945 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSRP1Q08945 RNU6-989P-201ENST00000362756 107 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 RNU1-20P-201ENST00000363314 162 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 Y_RNA.573-201ENST00000384763 105 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSRP1Q08945 RNU6-821P-201ENST00000390995 107 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 USP9YP6-201ENST00000413550 854 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SSRP1Q08945 RPS15AP12-201ENST00000419498 388 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AC005517.2-201ENST00000424673 553 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 RPS27AP12-201ENST00000429552 465 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 ELOCP18-201ENST00000434209 337 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AL589765.3-201ENST00000446084 462 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 VN1R34P-201ENST00000447387 883 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.2□□□□□ -1.58
SSRP1Q08945 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.2□□□□□ -1.58
SSRP1Q08945 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 RPS27AP17-201ENST00000463344 455 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 RN7SKP116-201ENST00000516902 319 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AP000827.1-201ENST00000527814 258 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSRP1Q08945 AC109635.3-201ENST00000529536 185 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.2□□□□□ -1.58
SSRP1Q08945 GSTP1P1-201ENST00000548078 319 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 SUB1P2-201ENST00000556401 297 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.2□□□□□ -1.58
SSRP1Q08945 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 AL669831.4-202ENST00000590817 238 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.2□□□□□ -1.58
SSRP1Q08945 AC020634.1-201ENST00000608701 549 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 OR6R2P-201ENST00000609216 300 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AC105429.2-201ENST00000610567 517 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 AC006338.1-201ENST00000618453 749 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSRP1Q08945 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SSRP1Q08945 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSRP1Q08945 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSRP1Q08945 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSRP1Q08945 AC027287.1-201ENST00000553115 1453 ntBASIC5.2□□□□□ -1.58
SSRP1Q08945 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSRP1Q08945 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SSRP1Q08945 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSRP1Q08945 Y_RNA.409-201ENST00000383990 98 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 RN7SKP285-201ENST00000410137 318 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 RNA5SP56-201ENST00000410277 118 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.19□□□□□ -1.58
SSRP1Q08945 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.19□□□□□ -1.58
SSRP1Q08945 RPL7AP25-201ENST00000423357 805 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 NEK4P1-201ENST00000433383 879 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 NFU1P2-201ENST00000448700 469 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.19□□□□□ -1.58
SSRP1Q08945 ST13P14-201ENST00000474095 734 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 DEFB109F-201ENST00000491870 277 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AC079382.1-201ENST00000493346 557 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.19□□□□□ -1.58
SSRP1Q08945 RNA5SP497-201ENST00000516081 97 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 Y_RNA.693-201ENST00000516641 110 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 NRON-201ENST00000517270 370 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.19□□□□□ -1.58
SSRP1Q08945 OR4P1P-201ENST00000530808 1136 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.19□□□□□ -1.58
SSRP1Q08945 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.19□□□□□ -1.58
SSRP1Q08945 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.19□□□□□ -1.58
SSRP1Q08945 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AL512360.1-201ENST00000555346 234 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AP005205.1-201ENST00000563503 508 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.19□□□□□ -1.58
SSRP1Q08945 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AP000907.4-201ENST00000604143 237 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms