Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 SBDSP1-204ENST00000453858 737 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC006539.3-201ENST00000454258 129 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AL359385.1-201ENST00000456509 365 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.44□□□□□ -1.86
SCN1BQ07699 ARPC3P2-201ENST00000457786 533 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC010468.1-201ENST00000461022 817 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 HMGN2P13-201ENST00000476476 274 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC105137.1-201ENST00000484355 562 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC041039.1-201ENST00000485656 536 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC099522.1-202ENST00000514718 367 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 SUMO2P20-201ENST00000520803 283 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.44□□□□□ -1.86
SCN1BQ07699 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC105224.1-201ENST00000587055 421 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC068790.4-201ENST00000602474 263 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AL596327.1-201ENST00000603629 213 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC008745.1-201ENST00000604064 271 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AL592221.1-201ENST00000605266 382 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC090186.1-201ENST00000605991 572 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AL158211.4-201ENST00000606988 584 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC068787.1-201ENST00000623908 691 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 OR5BE1P-202ENST00000641168 1176 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 AC021755.1-201ENST00000559747 1447 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SCN1BQ07699 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SCN1BQ07699 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 FAM133CP-201ENST00000332869 704 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 RNA5SP366-201ENST00000365454 123 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 RNU6-157P-201ENST00000383957 107 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SCN1BQ07699 AL356421.1-201ENST00000403255 413 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN1BQ07699 MTND2P9-201ENST00000422293 931 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN1BQ07699 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.43□□□□□ -1.86
SCN1BQ07699 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN1BQ07699 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.43□□□□□ -1.86
SCN1BQ07699 PAXBP1P1-201ENST00000449315 447 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AC104308.1-201ENST00000454621 333 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.43□□□□□ -1.86
SCN1BQ07699 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
SCN1BQ07699 RPL7P9-201ENST00000468715 747 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN1BQ07699 MTCYBP43-201ENST00000513621 740 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN1BQ07699 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SCN1BQ07699 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.43□□□□□ -1.86
SCN1BQ07699 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 DUXAP1-201ENST00000556632 463 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 MIR4443-201ENST00000585052 53 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.43□□□□□ -1.86
SCN1BQ07699 AL136981.2-201ENST00000617319 734 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.43□□□□□ -1.86
SCN1BQ07699 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.43□□□□□ -1.86
SCN1BQ07699 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCN1BQ07699 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN1BQ07699 AC012321.1-201ENST00000561622 1588 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC090740.1-201ENST00000623193 2262 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC092326.2-201ENST00000624772 1561 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN1BQ07699 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN1BQ07699 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.42□□□□□ -1.86
SCN1BQ07699 LARP1BP1-201ENST00000506036 1359 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN1BQ07699 DEFB108F-201ENST00000344638 222 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SCN1BQ07699 HSPE1P12-201ENST00000412576 301 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 HMGB3P23-201ENST00000414981 585 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC108032.1-201ENST00000416706 207 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 HMGB1P49-201ENST00000418882 569 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RPS15AP6-201ENST00000420703 385 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 RPL27AP8-201ENST00000424277 446 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 TXNL1P1-201ENST00000429528 554 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.42□□□□□ -1.86
SCN1BQ07699 AC090774.1-201ENST00000435925 246 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms