Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU6-564P-201ENST00000410983 104 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 RNU4-74P-201ENST00000411280 161 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.49□□□□□ -2.01
H3F3AP84243 RPL36P19-201ENST00000430744 301 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 XKRYP6-201ENST00000440468 1116 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 XKRYP3-201ENST00000442113 1116 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.49□□□□□ -2.01
H3F3AP84243 AC003982.1-202ENST00000469928 248 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AC015908.1-201ENST00000478739 476 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 AC091826.1-201ENST00000514065 313 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 RNA5SP367-201ENST00000516557 118 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
H3F3AP84243 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.49□□□□□ -2.01
H3F3AP84243 AC074029.2-201ENST00000551045 634 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AL442163.2-201ENST00000553912 710 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 DNAJC8P1-201ENST00000554535 372 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.49□□□□□ -2.01
H3F3AP84243 AC006504.3-201ENST00000586818 523 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 DUXAP4-201ENST00000603046 613 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AC009220.3-201ENST00000604318 586 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AC006249.1-201ENST00000621223 471 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AP003122.6-201ENST00000623831 495 ntBASIC2.49□□□□□ -2.01
H3F3AP84243 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.49□□□□□ -2.01
H3F3AP84243 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
H3F3AP84243 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.49□□□□□ -2.01
H3F3AP84243 FAM35BP-202ENST00000497389 3337 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 RPL9P7-201ENST00000330965 580 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 MIR142-201ENST00000384835 87 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 MIR1289-1-201ENST00000408836 144 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 MTCO3P12-201ENST00000416718 547 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 RPL7P10-201ENST00000417407 739 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 UBBP3-201ENST00000445497 241 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.48□□□□□ -2.01
H3F3AP84243 DSTNP2-201ENST00000504533 515 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.48□□□□□ -2.01
H3F3AP84243 MTCYBP37-201ENST00000510642 1133 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 SNORA9.3-201ENST00000516383 129 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.48□□□□□ -2.01
H3F3AP84243 AP003385.6-201ENST00000531603 374 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.48□□□□□ -2.01
H3F3AP84243 AC113368.1-201ENST00000603736 382 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 AL513477.2-201ENST00000607858 568 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.48□□□□□ -2.01
H3F3AP84243 AC245100.7-201ENST00000609678 442 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 AL391597.1-201ENST00000618707 694 ntBASIC2.48□□□□□ -2.01
H3F3AP84243 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
H3F3AP84243 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
H3F3AP84243 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
H3F3AP84243 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
H3F3AP84243 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
H3F3AP84243 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 MIR181B1-201ENST00000385240 110 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 Z92545.1-201ENST00000411782 234 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AL096701.2-201ENST00000416920 238 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 RPS24P13-201ENST00000442520 397 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 Z96811.1-201ENST00000445880 108 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.47□□□□□ -2.01
H3F3AP84243 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 AC093770.1-201ENST00000511559 571 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 ELOCP31-201ENST00000540463 467 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.47□□□□□ -2.01
H3F3AP84243 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 AC125611.2-201ENST00000551907 647 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 ZNF861P-201ENST00000588126 639 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 ELOCP29-201ENST00000588193 334 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AL669831.4-202ENST00000590817 238 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 AL033523.1-201ENST00000605153 153 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 AC073111.2-201ENST00000605657 1075 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 AL137790.1-201ENST00000634283 177 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 AL161431.1-201ENST00000618966 4205 ntBASIC2.47□□□□□ -2.01
H3F3AP84243 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
H3F3AP84243 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.47□□□□□ -2.01
H3F3AP84243 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.46□□□□□ -2.01
H3F3AP84243 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.46□□□□□ -2.02
H3F3AP84243 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
H3F3AP84243 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
H3F3AP84243 RNU6-799P-201ENST00000363567 107 ntBASIC2.46□□□□□ -2.02
H3F3AP84243 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.46□□□□□ -2.02
H3F3AP84243 AL138827.1-201ENST00000402666 306 ntBASIC2.46□□□□□ -2.02
H3F3AP84243 AL590004.2-201ENST00000404787 371 ntBASIC2.46□□□□□ -2.02
H3F3AP84243 RNA5SP56-201ENST00000410277 118 ntBASIC2.46□□□□□ -2.02
H3F3AP84243 RNA5SP21-201ENST00000410917 96 ntBASIC2.46□□□□□ -2.02
H3F3AP84243 RAP1BP1-201ENST00000412709 553 ntBASIC2.46□□□□□ -2.02
H3F3AP84243 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.46□□□□□ -2.02
H3F3AP84243 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.46□□□□□ -2.02
H3F3AP84243 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms