Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 TVP23BP1-201ENST00000557500 617 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL845331.3-202ENST00000562856 261 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 RN7SL600P-201ENST00000581811 299 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL049634.3-201ENST00000604968 457 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC011816.2-201ENST00000607089 556 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC116447.1-201ENST00000613153 453 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 AP005264.7-201ENST00000625003 745 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC099654.5-201ENST00000636479 350 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 AC017104.4-201ENST00000636283 1592 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 AC015813.6-201ENST00000624409 5808 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERVK_113P62684 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HERVK_113P62684 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 Y_RNA.38-201ENST00000362617 102 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 Y_RNA.89-201ENST00000363031 102 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 RNA5SP391-201ENST00000363456 119 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 RNU6-1085P-201ENST00000363576 107 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 RNU6-744P-201ENST00000365557 107 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 RNU6-1316P-201ENST00000384242 108 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 MT-TL1-201ENST00000386347 75 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 RNA5SP372-201ENST00000390836 115 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AL583835.1-201ENST00000399570 407 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AL356095.1-201ENST00000417217 199 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 RPS26P47-201ENST00000427219 348 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 MTCYBP45-201ENST00000435243 565 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 RPL23AP74-201ENST00000437246 471 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 TRBV26-201ENST00000456572 344 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC104563.1-201ENST00000476147 376 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AL132838.2-201ENST00000492041 314 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 RPS27AP13-201ENST00000498403 237 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 SNORA20.3-201ENST00000516880 132 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 HSPA8P13-201ENST00000523715 472 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC034268.2-201ENST00000571784 482 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC245389.1-201ENST00000605141 529 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC009994.1-201ENST00000606889 253 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 RNU6-87P-201ENST00000607561 108 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 MIR6867-201ENST00000610636 67 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC104260.1-201ENST00000616660 539 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC068722.2-201ENST00000618734 544 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.06□□□□□ -1.6
HERVK_113P62684 AC112484.5-201ENST00000624189 228 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 AC091905.1-201ENST00000624400 311 ntBASIC5.06□□□□□ -1.6
HERVK_113P62684 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113P62684 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113P62684 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.05□□□□□ -1.6
HERVK_113P62684 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HERVK_113P62684 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
HERVK_113P62684 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HERVK_113P62684 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HERVK_113P62684 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HERVK_113P62684 RNU6-853P-201ENST00000364306 107 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 RNU6-534P-201ENST00000364877 106 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 RNA5SP151-201ENST00000365632 117 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 RNU6-178P-201ENST00000384631 104 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 MRPL42P2-201ENST00000403169 426 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC127391.1-201ENST00000411737 98 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC009237.10-201ENST00000414112 510 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms