Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LSM6P62312 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
LSM6P62312 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
LSM6P62312 AC011460.1-201ENST00000636268 1834 ntBASIC2.54□□□□□ -2
LSM6P62312 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LSM6P62312 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LSM6P62312 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
LSM6P62312 RNU6-1249P-201ENST00000363237 111 ntBASIC2.53□□□□□ -2
LSM6P62312 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LSM6P62312 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
LSM6P62312 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.53□□□□□ -2
LSM6P62312 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.53□□□□□ -2
LSM6P62312 KRR1P1-201ENST00000419430 803 ntBASIC2.53□□□□□ -2
LSM6P62312 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
LSM6P62312 RPL36P19-201ENST00000430744 301 ntBASIC2.53□□□□□ -2
LSM6P62312 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.53□□□□□ -2
LSM6P62312 RPS29P6-201ENST00000438196 145 ntBASIC2.53□□□□□ -2
LSM6P62312 MRPL35P4-201ENST00000453682 566 ntBASIC2.53□□□□□ -2
LSM6P62312 AP001992.1-205ENST00000462248 379 ntBASIC2.53□□□□□ -2
LSM6P62312 AC034236.1-201ENST00000469891 373 ntBASIC2.53□□□□□ -2
LSM6P62312 AC015908.1-201ENST00000478739 476 ntBASIC2.53□□□□□ -2
LSM6P62312 AP001025.2-201ENST00000490908 477 ntBASIC2.53□□□□□ -2
LSM6P62312 CAB39P1-201ENST00000502277 460 ntBASIC2.53□□□□□ -2
LSM6P62312 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
LSM6P62312 AC117522.3-201ENST00000507974 584 ntBASIC2.53□□□□□ -2
LSM6P62312 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.53□□□□□ -2
LSM6P62312 RNU6-488P-201ENST00000515918 99 ntBASIC2.53□□□□□ -2
LSM6P62312 SNORA31.13-201ENST00000516624 135 ntBASIC2.53□□□□□ -2
LSM6P62312 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.53□□□□□ -2
LSM6P62312 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.53□□□□□ -2
LSM6P62312 AC128657.1-201ENST00000549459 145 ntBASIC2.53□□□□□ -2
LSM6P62312 AP005205.1-201ENST00000563503 508 ntBASIC2.53□□□□□ -2
LSM6P62312 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.53□□□□□ -2
LSM6P62312 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.53□□□□□ -2
LSM6P62312 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.53□□□□□ -2
LSM6P62312 XIAPP1-201ENST00000603162 600 ntBASIC2.53□□□□□ -2
LSM6P62312 AC007179.3-201ENST00000604976 235 ntBASIC2.53□□□□□ -2
LSM6P62312 AL513477.2-201ENST00000607858 568 ntBASIC2.53□□□□□ -2
LSM6P62312 AC013468.1-201ENST00000608680 598 ntBASIC2.53□□□□□ -2
LSM6P62312 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.53□□□□□ -2
LSM6P62312 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.53□□□□□ -2
LSM6P62312 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LSM6P62312 AL161431.1-201ENST00000618966 4205 ntBASIC2.53□□□□□ -2
LSM6P62312 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.52□□□□□ -2.01
LSM6P62312 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LSM6P62312 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LSM6P62312 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
LSM6P62312 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LSM6P62312 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 RPL9P7-201ENST00000330965 580 ntBASIC2.52□□□□□ -2.01
LSM6P62312 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LSM6P62312 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 RNU6-761P-201ENST00000384148 107 ntBASIC2.52□□□□□ -2.01
LSM6P62312 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LSM6P62312 SNORA11C-201ENST00000408532 129 ntBASIC2.52□□□□□ -2.01
LSM6P62312 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.52□□□□□ -2.01
LSM6P62312 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
LSM6P62312 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM6P62312 AL645937.1-202ENST00000421799 937 ntBASIC2.52□□□□□ -2.01
LSM6P62312 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LSM6P62312 AC004865.1-201ENST00000442276 1003 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.52□□□□□ -2.01
LSM6P62312 AC104978.1-201ENST00000449387 391 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC008280.2-201ENST00000455473 307 ntBASIC2.52□□□□□ -2.01
LSM6P62312 RPS4XP6-201ENST00000477670 797 ntBASIC2.52□□□□□ -2.01
LSM6P62312 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LSM6P62312 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.52□□□□□ -2.01
LSM6P62312 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
LSM6P62312 SCARNA13-201ENST00000516672 275 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC026241.1-201ENST00000517873 2142 ntBASIC2.52□□□□□ -2.01
LSM6P62312 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.52□□□□□ -2.01
LSM6P62312 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM6P62312 HPRT1P3-201ENST00000539521 576 ntBASIC2.52□□□□□ -2.01
LSM6P62312 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.52□□□□□ -2.01
LSM6P62312 MIR5195-201ENST00000583555 115 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC125494.3-201ENST00000602759 455 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC018618.2-201ENST00000604770 446 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC011374.2-201ENST00000607135 526 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC096577.2-201ENST00000611455 153 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC018926.3-201ENST00000618841 406 ntBASIC2.52□□□□□ -2.01
LSM6P62312 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.52□□□□□ -2.01
LSM6P62312 MIR3651-201ENST00000630427 90 ntBASIC2.52□□□□□ -2.01
LSM6P62312 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LSM6P62312 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.52□□□□□ -2.01
LSM6P62312 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LSM6P62312 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM6P62312 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM6P62312 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
LSM6P62312 AC073346.2-201ENST00000624724 2058 ntBASIC2.51□□□□□ -2.01
LSM6P62312 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
LSM6P62312 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LSM6P62312 RNU4-23P-201ENST00000362839 140 ntBASIC2.51□□□□□ -2.01
LSM6P62312 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
LSM6P62312 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms