Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CAV3P56539 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CAV3P56539 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.02□□□□□ -2.09
CAV3P56539 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.02□□□□□ -2.09
CAV3P56539 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 FTLP6-201ENST00000355274 422 ntBASIC2.02□□□□□ -2.09
CAV3P56539 U3.12-201ENST00000364498 214 ntBASIC2.02□□□□□ -2.09
CAV3P56539 SNORA51.11-201ENST00000384442 131 ntBASIC2.02□□□□□ -2.09
CAV3P56539 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 HMGB1P10-201ENST00000395823 563 ntBASIC2.02□□□□□ -2.09
CAV3P56539 UBE2V1P2-201ENST00000397758 440 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AL356057.1-202ENST00000402263 756 ntBASIC2.02□□□□□ -2.09
CAV3P56539 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.02□□□□□ -2.09
CAV3P56539 MTND1P23-201ENST00000416931 372 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.02□□□□□ -2.09
CAV3P56539 OR6C71P-201ENST00000432580 913 ntBASIC2.02□□□□□ -2.09
CAV3P56539 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.02□□□□□ -2.09
CAV3P56539 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.02□□□□□ -2.09
CAV3P56539 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.02□□□□□ -2.09
CAV3P56539 AP000852.1-201ENST00000472460 573 ntBASIC2.02□□□□□ -2.09
CAV3P56539 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 XKRY-201ENST00000510392 1100 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
CAV3P56539 AC119751.5-201ENST00000514077 770 ntBASIC2.02□□□□□ -2.09
CAV3P56539 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
CAV3P56539 NPM1P52-201ENST00000518264 846 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AC239860.2-201ENST00000525886 270 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.02□□□□□ -2.09
CAV3P56539 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.02□□□□□ -2.09
CAV3P56539 AC009097.3-201ENST00000563557 1018 ntBASIC2.02□□□□□ -2.09
CAV3P56539 ISCA1P3-201ENST00000577104 373 ntBASIC2.02□□□□□ -2.09
CAV3P56539 AC103881.1-201ENST00000603476 538 ntBASIC2.02□□□□□ -2.09
CAV3P56539 MIR1291-201ENST00000627649 87 ntBASIC2.02□□□□□ -2.09
CAV3P56539 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CAV3P56539 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.01□□□□□ -2.09
CAV3P56539 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CAV3P56539 RNA5SP393-201ENST00000363423 117 ntBASIC2.01□□□□□ -2.09
CAV3P56539 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CAV3P56539 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CAV3P56539 MIR144-201ENST00000384886 86 ntBASIC2.01□□□□□ -2.09
CAV3P56539 CCNB2P1-201ENST00000399411 1150 ntBASIC2.01□□□□□ -2.09
CAV3P56539 ATF1P1-201ENST00000406040 927 ntBASIC2.01□□□□□ -2.09
CAV3P56539 PRELID3BP11-201ENST00000414230 479 ntBASIC2.01□□□□□ -2.09
CAV3P56539 HIGD1AP11-201ENST00000438361 280 ntBASIC2.01□□□□□ -2.09
CAV3P56539 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.01□□□□□ -2.09
CAV3P56539 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.01□□□□□ -2.09
CAV3P56539 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.01□□□□□ -2.09
CAV3P56539 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CAV3P56539 RPL21P131-201ENST00000497298 483 ntBASIC2.01□□□□□ -2.09
CAV3P56539 MTATP6P22-201ENST00000507369 598 ntBASIC2.01□□□□□ -2.09
CAV3P56539 SNORA31.1-201ENST00000515993 133 ntBASIC2.01□□□□□ -2.09
CAV3P56539 SNORA31.5-201ENST00000516190 133 ntBASIC2.01□□□□□ -2.09
CAV3P56539 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.01□□□□□ -2.09
CAV3P56539 AP001646.1-201ENST00000527936 915 ntBASIC2.01□□□□□ -2.09
CAV3P56539 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.01□□□□□ -2.09
CAV3P56539 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.01□□□□□ -2.09
CAV3P56539 OR4U1P-201ENST00000554958 912 ntBASIC2.01□□□□□ -2.09
CAV3P56539 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.01□□□□□ -2.09
CAV3P56539 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CAV3P56539 AC025034.2-201ENST00000623264 286 ntBASIC2.01□□□□□ -2.09
CAV3P56539 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.01□□□□□ -2.09
CAV3P56539 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CAV3P56539 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2□□□□□ -2.09
CAV3P56539 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2□□□□□ -2.09
CAV3P56539 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2□□□□□ -2.09
CAV3P56539 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2□□□□□ -2.09
CAV3P56539 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
CAV3P56539 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2□□□□□ -2.09
CAV3P56539 HNRNPDLP1-201ENST00000412834 550 ntBASIC2□□□□□ -2.09
CAV3P56539 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2□□□□□ -2.09
CAV3P56539 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2□□□□□ -2.09
CAV3P56539 MTCO1P39-201ENST00000426148 480 ntBASIC2□□□□□ -2.09
CAV3P56539 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 HMGB3P15-201ENST00000507326 574 ntBASIC2□□□□□ -2.09
CAV3P56539 AC027309.2-201ENST00000520566 192 ntBASIC2□□□□□ -2.09
CAV3P56539 AP004242.1-201ENST00000533701 349 ntBASIC2□□□□□ -2.09
CAV3P56539 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2□□□□□ -2.09
CAV3P56539 AC012213.4-201ENST00000606457 354 ntBASIC2□□□□□ -2.09
CAV3P56539 AC103810.6-201ENST00000606708 136 ntBASIC2□□□□□ -2.09
CAV3P56539 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CAV3P56539 MIR6852-201ENST00000621699 66 ntBASIC2□□□□□ -2.09
CAV3P56539 AC116563.2-201ENST00000624751 535 ntBASIC2□□□□□ -2.09
CAV3P56539 AC243829.7-201ENST00000633081 225 ntBASIC2□□□□□ -2.09
CAV3P56539 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2□□□□□ -2.09
CAV3P56539 AC010733.2-201ENST00000589496 5702 ntBASIC2□□□□□ -2.09
CAV3P56539 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2□□□□□ -2.09
CAV3P56539 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 MAPK10-322ENST00000641485 4530 ntBASIC2□□□□□ -2.09
CAV3P56539 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CAV3P56539 MTCO1P6-201ENST00000481192 1384 ntBASIC1.99□□□□□ -2.09
CAV3P56539 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms