Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.24□□□□□ -1.89
PAX9P55771 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PAX9P55771 snoU13.3-201ENST00000459441 104 ntBASIC3.24□□□□□ -1.89
PAX9P55771 RPL23AP62-201ENST00000463396 453 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AC106872.3-201ENST00000495104 446 ntBASIC3.24□□□□□ -1.89
PAX9P55771 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.24□□□□□ -1.89
PAX9P55771 AC021678.1-201ENST00000505195 936 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AC022447.3-201ENST00000506865 495 ntBASIC3.24□□□□□ -1.89
PAX9P55771 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.24□□□□□ -1.89
PAX9P55771 AC023141.12-201ENST00000512399 199 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AC022447.1-201ENST00000515358 464 ntBASIC3.24□□□□□ -1.89
PAX9P55771 RN7SKP116-201ENST00000516902 319 ntBASIC3.24□□□□□ -1.89
PAX9P55771 RN7SKP92-201ENST00000517266 244 ntBASIC3.24□□□□□ -1.89
PAX9P55771 IGKV2-23-201ENST00000518729 323 ntBASIC3.24□□□□□ -1.89
PAX9P55771 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.24□□□□□ -1.89
PAX9P55771 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.24□□□□□ -1.89
PAX9P55771 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.24□□□□□ -1.89
PAX9P55771 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.24□□□□□ -1.89
PAX9P55771 AC105233.3-201ENST00000531125 744 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AP003385.6-201ENST00000531603 374 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.24□□□□□ -1.89
PAX9P55771 AC107954.1-201ENST00000565906 727 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.24□□□□□ -1.89
PAX9P55771 AC006270.2-201ENST00000578523 652 ntBASIC3.24□□□□□ -1.89
PAX9P55771 MIR4307-201ENST00000582802 84 ntBASIC3.24□□□□□ -1.89
PAX9P55771 HMGN2P28-201ENST00000606102 262 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AC025594.3-201ENST00000613068 790 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AL596245.1-201ENST00000618994 362 ntBASIC3.24□□□□□ -1.89
PAX9P55771 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.24□□□□□ -1.89
PAX9P55771 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PAX9P55771 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.24□□□□□ -1.89
PAX9P55771 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PAX9P55771 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PAX9P55771 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
PAX9P55771 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 MFSD8-216ENST00000641147 4009 ntBASIC3.23□□□□□ -1.89
PAX9P55771 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 SNORD35B-201ENST00000363660 87 ntBASIC3.23□□□□□ -1.89
PAX9P55771 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 Y_RNA.553-201ENST00000384670 102 ntBASIC3.23□□□□□ -1.89
PAX9P55771 MIR1250-201ENST00000408098 113 ntBASIC3.23□□□□□ -1.89
PAX9P55771 RNU2-37P-201ENST00000410695 177 ntBASIC3.23□□□□□ -1.89
PAX9P55771 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 RPL21P109-201ENST00000422213 475 ntBASIC3.23□□□□□ -1.89
PAX9P55771 RPS27AP7-201ENST00000422792 455 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC006548.1-201ENST00000427470 102 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AL589823.1-201ENST00000429577 183 ntBASIC3.23□□□□□ -1.89
PAX9P55771 MRPS18BP2-201ENST00000434310 759 ntBASIC3.23□□□□□ -1.89
PAX9P55771 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PAX9P55771 MTND1P28-201ENST00000435623 950 ntBASIC3.23□□□□□ -1.89
PAX9P55771 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 AL353706.1-201ENST00000436728 494 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AC091862.1-201ENST00000438016 1100 ntBASIC3.23□□□□□ -1.89
PAX9P55771 RPL23AP46-201ENST00000438548 490 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AL138799.3-201ENST00000438968 350 ntBASIC3.23□□□□□ -1.89
PAX9P55771 MTCO1P19-201ENST00000443487 500 ntBASIC3.23□□□□□ -1.89
PAX9P55771 PHBP16-201ENST00000446318 950 ntBASIC3.23□□□□□ -1.89
PAX9P55771 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 PPIAP3-201ENST00000450588 505 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AL353691.1-201ENST00000451332 387 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AC009963.2-201ENST00000453431 138 ntBASIC3.23□□□□□ -1.89
PAX9P55771 RN7SL98P-201ENST00000462271 300 ntBASIC3.23□□□□□ -1.89
PAX9P55771 RPS29P22-201ENST00000472363 168 ntBASIC3.23□□□□□ -1.89
PAX9P55771 RN7SL481P-201ENST00000477764 299 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AC092104.1-201ENST00000497346 1441 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AK3P4-201ENST00000504283 583 ntBASIC3.23□□□□□ -1.89
PAX9P55771 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC091435.1-201ENST00000505442 584 ntBASIC3.23□□□□□ -1.89
PAX9P55771 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 AC111000.3-201ENST00000508057 576 ntBASIC3.23□□□□□ -1.89
PAX9P55771 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.23□□□□□ -1.89
PAX9P55771 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.23□□□□□ -1.89
PAX9P55771 EEF1B2P4-201ENST00000551398 348 ntBASIC3.23□□□□□ -1.89
PAX9P55771 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.23□□□□□ -1.89
PAX9P55771 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.23□□□□□ -1.89
PAX9P55771 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.23□□□□□ -1.89
PAX9P55771 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.23□□□□□ -1.89
PAX9P55771 RPL12P25-202ENST00000598100 674 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AC112187.2-201ENST00000604345 283 ntBASIC3.23□□□□□ -1.89
PAX9P55771 AL451044.1-201ENST00000604867 238 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms