Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RN7SKP159-201ENST00000410657 292 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 RNU2-37P-201ENST00000410695 177 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 EI24P1-201ENST00000416584 867 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 Z97055.1-201ENST00000419730 712 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC092647.1-201ENST00000420654 287 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 RPL7P30-201ENST00000420888 709 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLCNKAP51800 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCNKAP51800 MED14P1-201ENST00000430517 648 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC010153.1-201ENST00000432862 727 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 UBE2FP3-201ENST00000436366 524 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 MTND4P6-201ENST00000438297 472 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 MTND1P30-201ENST00000441241 901 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCNKAP51800 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 RPL36AP33-201ENST00000450395 310 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 TPTE2P5-203ENST00000458118 728 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 OR9M1P-201ENST00000459641 921 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC026410.2-201ENST00000460281 156 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 RPL21P11-201ENST00000461458 483 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC109486.1-201ENST00000486833 374 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC068305.1-201ENST00000497406 726 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC078918.1-201ENST00000498515 228 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC091435.1-201ENST00000505442 584 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 RPL12P22-201ENST00000519073 490 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC087276.1-201ENST00000529659 480 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC092851.1-201ENST00000535964 478 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 GTF2IP22-201ENST00000554443 182 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 GNRHR2P1-201ENST00000555315 631 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC012603.1-201ENST00000606424 528 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 MIR7844-201ENST00000616161 122 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 AC092140.2-201ENST00000618027 521 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC130650.2-201ENST00000618736 2403 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 MTND4P16-201ENST00000466108 1367 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.86□□□□□ -1.79
CLCNKAP51800 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 LINC00561-201ENST00000565815 2738 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLCNKAP51800 RNU4-21P-201ENST00000362802 126 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 RNA5SP97-201ENST00000365006 84 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 RNU6-723P-201ENST00000383973 107 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AL355379.1-201ENST00000405542 640 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 OR51AB1P-201ENST00000429046 620 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AL589823.1-201ENST00000429577 183 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 RANP8-201ENST00000444720 713 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AL590399.6-201ENST00000446396 307 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 MTCO2P7-201ENST00000446518 666 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCNKAP51800 RNU7-136P-201ENST00000458819 69 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 RPL9P32-201ENST00000464118 620 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 RAP1BP2-201ENST00000478270 544 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC092451.1-201ENST00000480211 153 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC108941.1-201ENST00000502853 530 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC114981.1-201ENST00000503897 678 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.85□□□□□ -1.79
CLCNKAP51800 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AC023161.2-201ENST00000551218 780 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCNKAP51800 HSPE1P5-201ENST00000561489 272 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC136618.2-201ENST00000575091 400 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 MIR5685-201ENST00000579080 79 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC090616.5-202ENST00000582111 297 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms