Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL121871.1-201ENST00000443413 436 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 CDC27P1-201ENST00000445384 715 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AL500522.2-201ENST00000448562 343 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-1P43699 FABP3P2-201ENST00000453169 399 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 SNORD121B-201ENST00000458838 81 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 RPL12P20-201ENST00000475538 479 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-1P43699 RN7SL271P-201ENST00000487601 295 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-1P43699 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-1P43699 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 AC034222.1-201ENST00000494052 532 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 BTF3L4P4-201ENST00000506381 449 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 MTND4P2-201ENST00000507767 1203 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.35□□□□□ -1.87
NKX2-1P43699 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 MTND3P5-201ENST00000512798 333 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 MTND5P4-201ENST00000514978 288 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 Y_RNA.655-201ENST00000515919 96 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NKX2-1P43699 AP004247.1-201ENST00000531556 1289 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-1P43699 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-1P43699 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 AC012414.6-201ENST00000568241 401 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC141257.3-201ENST00000572906 215 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 XIAPP1-201ENST00000603162 600 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC006254.3-201ENST00000603353 884 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AL031176.1-201ENST00000604554 466 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC024940.4-201ENST00000605507 246 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC006023.2-201ENST00000609916 167 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 Mico1.1-201ENST00000611698 204 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NKX2-1P43699 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC009878.1-201ENST00000621819 340 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC106871.1-201ENST00000568324 3102 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-1P43699 AC006378.2-201ENST00000623178 2476 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-1P43699 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
NKX2-1P43699 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-1P43699 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-1P43699 AL133383.2-201ENST00000622958 2336 ntBASIC3.35□□□□□ -1.87
NKX2-1P43699 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-1P43699 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-1P43699 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-1P43699 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-1P43699 Y_RNA.234-201ENST00000364409 97 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-1P43699 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX2-1P43699 MTCYBP45-201ENST00000435243 565 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 RPL37P21-201ENST00000435890 276 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL353706.1-201ENST00000436728 494 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL138799.3-201ENST00000438968 350 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 ST13P20-201ENST00000447996 1065 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-1P43699 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AC010285.1-201ENST00000470580 392 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-1P43699 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AC026726.1-201ENST00000512859 601 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 RNU6-714P-201ENST00000516963 103 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-1P43699 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-1P43699 AP000873.5-201ENST00000533906 236 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC126177.3-201ENST00000551839 688 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 SETP2-201ENST00000553886 926 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX2-1P43699 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-1P43699 RPL23AP87-202ENST00000573039 466 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC083760.1-201ENST00000589621 670 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC007687.1-201ENST00000602704 304 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC012669.1-201ENST00000603209 283 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC011451.2-201ENST00000604303 598 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX2-1P43699 AC113403.1-201ENST00000604910 193 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 BCRP9-201ENST00000605312 388 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC068276.1-201ENST00000605793 379 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL031775.1-201ENST00000607014 887 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC107214.2-201ENST00000608204 634 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AL591424.2-201ENST00000617023 128 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC002550.2-201ENST00000621246 394 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 AC140479.6-201ENST00000633535 357 ntBASIC3.34□□□□□ -1.87
NKX2-1P43699 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-1P43699 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-1P43699 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.34□□□□□ -1.88
NKX2-1P43699 EXOC5P1-201ENST00000510543 1969 ntBASIC3.34□□□□□ -1.88
NKX2-1P43699 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NKX2-1P43699 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NKX2-1P43699 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms