Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC092447.9-201ENST00000603395 144 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AL031320.1-201ENST00000604177 357 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC013244.1-201ENST00000604279 193 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC023813.4-201ENST00000607580 580 ntBASIC4.82□□□□□ -1.64
GDNFP39905 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.82□□□□□ -1.64
GDNFP39905 MIR6071-201ENST00000616741 78 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
GDNFP39905 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 BDP1P-201ENST00000582658 1990 ntBASIC4.82□□□□□ -1.64
GDNFP39905 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GDNFP39905 OR55B1P-203ENST00000641518 2602 ntBASIC4.81□□□□□ -1.64
GDNFP39905 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.81□□□□□ -1.64
GDNFP39905 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 RNU6-874P-201ENST00000362390 105 ntBASIC4.81□□□□□ -1.64
GDNFP39905 RNA5SP500-201ENST00000364486 119 ntBASIC4.81□□□□□ -1.64
GDNFP39905 RNU6-1226P-201ENST00000384317 107 ntBASIC4.81□□□□□ -1.64
GDNFP39905 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GDNFP39905 RNU4-46P-201ENST00000410818 138 ntBASIC4.81□□□□□ -1.64
GDNFP39905 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.81□□□□□ -1.64
GDNFP39905 AC115283.1-201ENST00000427353 400 ntBASIC4.81□□□□□ -1.64
GDNFP39905 RPL7AP49-201ENST00000429522 581 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AL591438.1-201ENST00000433508 581 ntBASIC4.81□□□□□ -1.64
GDNFP39905 GAPDHP48-201ENST00000436626 961 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC092013.1-201ENST00000438795 332 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.81□□□□□ -1.64
GDNFP39905 RPS15AP27-201ENST00000449183 343 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC002553.2-201ENST00000453217 340 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC116533.1-201ENST00000459748 321 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC104472.2-201ENST00000469035 601 ntBASIC4.81□□□□□ -1.64
GDNFP39905 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 AC025458.1-201ENST00000506046 166 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.81□□□□□ -1.64
GDNFP39905 AC091912.1-201ENST00000511351 248 ntBASIC4.81□□□□□ -1.64
GDNFP39905 Y_RNA.680-201ENST00000516441 93 ntBASIC4.81□□□□□ -1.64
GDNFP39905 SNORD116.3-201ENST00000517176 78 ntBASIC4.81□□□□□ -1.64
GDNFP39905 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.81□□□□□ -1.64
GDNFP39905 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.81□□□□□ -1.64
GDNFP39905 AC005363.1-201ENST00000530779 351 ntBASIC4.81□□□□□ -1.64
GDNFP39905 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.81□□□□□ -1.64
GDNFP39905 AC091078.2-201ENST00000557145 559 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC040958.1-201ENST00000561102 201 ntBASIC4.81□□□□□ -1.64
GDNFP39905 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
GDNFP39905 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.81□□□□□ -1.64
GDNFP39905 AL499605.1-201ENST00000604628 403 ntBASIC4.81□□□□□ -1.64
GDNFP39905 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AL136131.3-201ENST00000607600 188 ntBASIC4.81□□□□□ -1.64
GDNFP39905 AC067931.1-201ENST00000624190 671 ntBASIC4.81□□□□□ -1.64
GDNFP39905 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.81□□□□□ -1.64
GDNFP39905 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.81□□□□□ -1.64
GDNFP39905 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 NXPH1-205ENST00000602349 1953 ntBASIC4.81□□□□□ -1.64
GDNFP39905 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.81□□□□□ -1.64
GDNFP39905 SAMMSON-213ENST00000641336 1521 ntBASIC4.81□□□□□ -1.64
GDNFP39905 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.81□□□□□ -1.64
GDNFP39905 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
GDNFP39905 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GDNFP39905 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.8□□□□□ -1.64
GDNFP39905 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GDNFP39905 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GDNFP39905 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
GDNFP39905 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
GDNFP39905 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GDNFP39905 Z95331.1-201ENST00000623075 23112 ntBASIC4.8□□□□□ -1.64
GDNFP39905 TPTE2P4-201ENST00000258589 1605 ntBASIC4.8□□□□□ -1.64
GDNFP39905 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
GDNFP39905 MTCO1P24-201ENST00000515438 1558 ntBASIC4.8□□□□□ -1.64
GDNFP39905 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms