Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPA1P20036 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 CDR1-202ENST00000625883 1485 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AP002907.1-201ENST00000606361 1430 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 MTND4P10-201ENST00000446199 1363 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL513185.3-201ENST00000433335 1300 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 FRG1CP-201ENST00000358464 769 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL354719.1-201ENST00000406535 843 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 RNU6-1077P-201ENST00000410506 102 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 RPL7P44-201ENST00000424827 742 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 EZH2P1-201ENST00000431167 291 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 RAC1P7-201ENST00000445367 377 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 RPL36AP33-201ENST00000450395 310 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 PTGES3P5-201ENST00000455109 434 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AP001992.1-205ENST00000462248 379 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC108734.3-201ENST00000481241 1165 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AP003102.1-201ENST00000525638 661 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC118942.1-201ENST00000529674 1035 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 HSPE1P3-201ENST00000559254 309 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL022067.1-201ENST00000602426 454 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL606834.3-201ENST00000602615 496 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC009570.1-201ENST00000609599 745 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AL392048.1-201ENST00000613946 534 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC084824.4-201ENST00000620106 731 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC010872.1-201ENST00000624225 675 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 AC090897.3-201ENST00000636973 1157 ntBASIC3.54□□□□□ -1.84
HLA-DPA1P20036 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPA1P20036 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC005183.1-201ENST00000603687 1979 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 MIR449B-201ENST00000384995 97 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 RNU6-882P-201ENST00000391025 103 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 RPS29P4-201ENST00000414733 161 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 MRPL50P2-201ENST00000416821 482 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 SYF2P2-201ENST00000417620 583 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 DBIP2-201ENST00000419076 262 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 MTATP6P4-201ENST00000427725 675 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AL590233.1-201ENST00000430017 456 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC091286.1-201ENST00000431233 461 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 HSPD1P21-201ENST00000436541 245 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC106707.2-201ENST00000484182 374 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC023424.2-201ENST00000493479 777 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC090453.1-201ENST00000495560 436 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 SLC25A15P5-201ENST00000508033 253 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC103843.2-201ENST00000530523 682 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC096947.1-201ENST00000603233 470 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC008739.3-201ENST00000603262 127 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC009220.3-201ENST00000604318 586 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AL365400.2-201ENST00000605604 902 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC080013.4-201ENST00000607624 649 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC123767.1-202ENST00000620407 817 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 U4.6-201ENST00000621618 127 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC104985.3-201ENST00000623479 597 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 AC009093.8-201ENST00000641769 292 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 HSPA8P1-201ENST00000425843 1833 ntBASIC3.53□□□□□ -1.84
HLA-DPA1P20036 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPA1P20036 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms