Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR4301-201ENST00000577203 66 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC010928.2-201ENST00000588017 287 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC002545.1-201ENST00000592511 181 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.32□□□□□ -1.24
CD44P16070 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC7.32□□□□□ -1.24
CD44P16070 MRPL57P3-201ENST00000619218 176 ntBASIC7.32□□□□□ -1.24
CD44P16070 AL121890.5-201ENST00000620848 304 ntBASIC7.32□□□□□ -1.24
CD44P16070 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CD44P16070 DDX10P1-201ENST00000448545 1933 ntBASIC7.32□□□□□ -1.24
CD44P16070 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.32□□□□□ -1.24
CD44P16070 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CD44P16070 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.32□□□□□ -1.24
CD44P16070 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CD44P16070 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 AC010624.4-201ENST00000597606 1351 ntBASIC7.32□□□□□ -1.24
CD44P16070 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.32□□□□□ -1.24
CD44P16070 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 AC116158.1-201ENST00000560231 2129 ntBASIC7.31□□□□□ -1.24
CD44P16070 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CD44P16070 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CD44P16070 RNA5SP188-201ENST00000362916 129 ntBASIC7.31□□□□□ -1.24
CD44P16070 MIR29B2-201ENST00000385055 81 ntBASIC7.31□□□□□ -1.24
CD44P16070 MTHFD2P2-201ENST00000407725 247 ntBASIC7.31□□□□□ -1.24
CD44P16070 RNU6-588P-201ENST00000410281 105 ntBASIC7.31□□□□□ -1.24
CD44P16070 RNU6-554P-201ENST00000410466 106 ntBASIC7.31□□□□□ -1.24
CD44P16070 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.31□□□□□ -1.24
CD44P16070 AL929410.2-201ENST00000451170 189 ntBASIC7.31□□□□□ -1.24
CD44P16070 RN7SL492P-201ENST00000460700 295 ntBASIC7.31□□□□□ -1.24
CD44P16070 AP000870.1-201ENST00000472927 406 ntBASIC7.31□□□□□ -1.24
CD44P16070 RPS10P28-201ENST00000480396 498 ntBASIC7.31□□□□□ -1.24
CD44P16070 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CD44P16070 AC139272.1-201ENST00000505516 640 ntBASIC7.31□□□□□ -1.24
CD44P16070 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC7.31□□□□□ -1.24
CD44P16070 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.31□□□□□ -1.24
CD44P16070 AC021269.2-201ENST00000532318 330 ntBASIC7.31□□□□□ -1.24
CD44P16070 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.31□□□□□ -1.24
CD44P16070 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.31□□□□□ -1.24
CD44P16070 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.31□□□□□ -1.24
CD44P16070 MIR378C-201ENST00000578683 81 ntBASIC7.31□□□□□ -1.24
CD44P16070 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 AC005176.2-201ENST00000596933 147 ntBASIC7.31□□□□□ -1.24
CD44P16070 AC022441.3-201ENST00000605737 136 ntBASIC7.31□□□□□ -1.24
CD44P16070 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.31□□□□□ -1.24
CD44P16070 AC004241.2-201ENST00000614562 444 ntBASIC7.31□□□□□ -1.24
CD44P16070 AC009951.1-201ENST00000623674 2614 ntBASIC7.31□□□□□ -1.24
CD44P16070 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.31□□□□□ -1.24
CD44P16070 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CD44P16070 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CD44P16070 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.31□□□□□ -1.24
CD44P16070 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CD44P16070 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 AP003175.1-201ENST00000641383 6658 ntBASIC7.3□□□□□ -1.24
CD44P16070 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CD44P16070 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 snoU2_19.4-201ENST00000364329 80 ntBASIC7.3□□□□□ -1.24
CD44P16070 RNU11-4P-201ENST00000391149 133 ntBASIC7.3□□□□□ -1.24
CD44P16070 AL117339.3-201ENST00000418733 162 ntBASIC7.3□□□□□ -1.24
CD44P16070 CYCSP52-201ENST00000422857 310 ntBASIC7.3□□□□□ -1.24
CD44P16070 AC009362.1-201ENST00000427253 406 ntBASIC7.3□□□□□ -1.24
CD44P16070 AL445687.1-201ENST00000439946 251 ntBASIC7.3□□□□□ -1.24
CD44P16070 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC7.3□□□□□ -1.24
CD44P16070 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC7.3□□□□□ -1.24
CD44P16070 AC092798.1-201ENST00000458542 409 ntBASIC7.3□□□□□ -1.24
CD44P16070 AC092865.4-201ENST00000477936 615 ntBASIC7.3□□□□□ -1.24
CD44P16070 RN7SL868P-201ENST00000485915 303 ntBASIC7.3□□□□□ -1.24
CD44P16070 MIR892C-201ENST00000516410 77 ntBASIC7.3□□□□□ -1.24
CD44P16070 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.3□□□□□ -1.24
CD44P16070 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.3□□□□□ -1.24
CD44P16070 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CD44P16070 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC7.3□□□□□ -1.24
CD44P16070 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC7.3□□□□□ -1.24
CD44P16070 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC7.3□□□□□ -1.24
CD44P16070 NPIPB1P-202ENST00000588786 828 ntBASIC7.3□□□□□ -1.24
CD44P16070 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC7.3□□□□□ -1.24
CD44P16070 AC010632.3-201ENST00000611377 369 ntBASIC7.3□□□□□ -1.24
CD44P16070 MIR6829-201ENST00000620375 67 ntBASIC7.3□□□□□ -1.24
CD44P16070 CYP4F35P-202ENST00000636121 390 ntBASIC7.3□□□□□ -1.24
CD44P16070 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms