Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC008521.1-201ENST00000587471 187 ntBASIC5.37□□□□□ -1.55
NID1P14543 MIR6793-201ENST00000612376 63 ntBASIC5.37□□□□□ -1.55
NID1P14543 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.37□□□□□ -1.55
NID1P14543 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.37□□□□□ -1.55
NID1P14543 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NID1P14543 AC020633.1-201ENST00000468439 2247 ntBASIC5.37□□□□□ -1.55
NID1P14543 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.37□□□□□ -1.55
NID1P14543 AL359854.1-201ENST00000614203 1594 ntBASIC5.37□□□□□ -1.55
NID1P14543 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.37□□□□□ -1.55
NID1P14543 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NID1P14543 AP004607.3-201ENST00000530354 3915 ntBASIC5.37□□□□□ -1.55
NID1P14543 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
NID1P14543 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NID1P14543 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 RNU4-50P-201ENST00000364361 141 ntBASIC5.36□□□□□ -1.55
NID1P14543 Y_RNA.274-201ENST00000364714 101 ntBASIC5.36□□□□□ -1.55
NID1P14543 RN7SKP186-201ENST00000365371 303 ntBASIC5.36□□□□□ -1.55
NID1P14543 RNA5SP91-201ENST00000390902 119 ntBASIC5.36□□□□□ -1.55
NID1P14543 RNU2-14P-201ENST00000411053 191 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC234781.4-201ENST00000419384 244 ntBASIC5.36□□□□□ -1.55
NID1P14543 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 TMSB4XP3-201ENST00000445144 114 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.36□□□□□ -1.55
NID1P14543 AC104073.1-201ENST00000451988 151 ntBASIC5.36□□□□□ -1.55
NID1P14543 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 FTH1P2-201ENST00000466086 412 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC087884.1-201ENST00000469738 328 ntBASIC5.36□□□□□ -1.55
NID1P14543 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 RPL17P19-201ENST00000489069 552 ntBASIC5.36□□□□□ -1.55
NID1P14543 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.36□□□□□ -1.55
NID1P14543 Y_RNA.667-201ENST00000516212 107 ntBASIC5.36□□□□□ -1.55
NID1P14543 RNA5SP438-201ENST00000516561 112 ntBASIC5.36□□□□□ -1.55
NID1P14543 RNU6-255P-201ENST00000516957 105 ntBASIC5.36□□□□□ -1.55
NID1P14543 WBP1LP3-201ENST00000523033 208 ntBASIC5.36□□□□□ -1.55
NID1P14543 AP000648.1-201ENST00000529682 397 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC109446.1-201ENST00000566172 220 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC090517.1-201ENST00000569307 266 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC243654.2-201ENST00000612843 443 ntBASIC5.36□□□□□ -1.55
NID1P14543 AC022467.1-201ENST00000614738 749 ntBASIC5.36□□□□□ -1.55
NID1P14543 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.36□□□□□ -1.55
NID1P14543 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 AL049555.1-201ENST00000562834 1933 ntBASIC5.36□□□□□ -1.55
NID1P14543 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NID1P14543 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
NID1P14543 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NID1P14543 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.36□□□□□ -1.55
NID1P14543 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NID1P14543 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NID1P14543 MFSD8-219ENST00000641228 2559 ntBASIC5.35□□□□□ -1.55
NID1P14543 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NID1P14543 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.35□□□□□ -1.55
NID1P14543 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.35□□□□□ -1.55
NID1P14543 GABPAP-201ENST00000419271 1356 ntBASIC5.35□□□□□ -1.55
NID1P14543 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.35□□□□□ -1.55
NID1P14543 AC108751.5-201ENST00000492880 1336 ntBASIC5.35□□□□□ -1.55
NID1P14543 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 MIR323A-201ENST00000362199 86 ntBASIC5.35□□□□□ -1.55
NID1P14543 RNU6-545P-201ENST00000362681 104 ntBASIC5.35□□□□□ -1.55
NID1P14543 RN7SKP115-201ENST00000363177 317 ntBASIC5.35□□□□□ -1.55
NID1P14543 RNA5SP242-201ENST00000364171 118 ntBASIC5.35□□□□□ -1.55
NID1P14543 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NID1P14543 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
NID1P14543 RNU6-434P-201ENST00000384376 107 ntBASIC5.35□□□□□ -1.55
NID1P14543 Y_RNA.539-201ENST00000384635 107 ntBASIC5.35□□□□□ -1.55
NID1P14543 Y_RNA.577-201ENST00000384794 101 ntBASIC5.35□□□□□ -1.55
NID1P14543 SAR1AP2-201ENST00000392696 594 ntBASIC5.35□□□□□ -1.55
NID1P14543 PCNPP3-201ENST00000393579 471 ntBASIC5.35□□□□□ -1.55
NID1P14543 RNA5SP107-201ENST00000411358 122 ntBASIC5.35□□□□□ -1.55
NID1P14543 C4BPAP2-201ENST00000428434 478 ntBASIC5.35□□□□□ -1.55
NID1P14543 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.35□□□□□ -1.55
NID1P14543 AC004383.1-201ENST00000438135 289 ntBASIC5.35□□□□□ -1.55
NID1P14543 AL138752.1-201ENST00000452964 351 ntBASIC5.35□□□□□ -1.55
NID1P14543 AC007998.1-201ENST00000474156 672 ntBASIC5.35□□□□□ -1.55
NID1P14543 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NID1P14543 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.35□□□□□ -1.55
NID1P14543 RNU6-397P-201ENST00000516226 104 ntBASIC5.35□□□□□ -1.55
NID1P14543 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.35□□□□□ -1.55
NID1P14543 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.35□□□□□ -1.55
NID1P14543 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.35□□□□□ -1.55
NID1P14543 AC006600.1-201ENST00000572529 153 ntBASIC5.35□□□□□ -1.55
NID1P14543 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.35□□□□□ -1.55
NID1P14543 AC008162.1-201ENST00000604718 254 ntBASIC5.35□□□□□ -1.55
NID1P14543 AL670379.4-201ENST00000605279 254 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms