Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.61□□□□□ -1.99
COL11A1P12107 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 RPL7P31-201ENST00000450192 724 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.61□□□□□ -1.99
COL11A1P12107 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.61□□□□□ -1.99
COL11A1P12107 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 NDUFB4P9-201ENST00000511646 388 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 RNU6-347P-201ENST00000516658 105 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 RANP3-201ENST00000530970 276 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AC019131.2-201ENST00000609071 870 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AL160394.1-201ENST00000624765 724 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 AC084035.1-201ENST00000634543 607 ntBASIC2.61□□□□□ -1.99
COL11A1P12107 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
COL11A1P12107 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL11A1P12107 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL11A1P12107 AC091564.4-201ENST00000533934 2194 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 Y_RNA.238-201ENST00000364441 102 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.6□□□□□ -1.99
COL11A1P12107 ARF4P2-201ENST00000430209 526 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.6□□□□□ -1.99
COL11A1P12107 AC008571.1-201ENST00000467232 300 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 SEPT7P6-201ENST00000469999 1143 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 MIR4716-201ENST00000579628 84 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.6□□□□□ -1.99
COL11A1P12107 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.6□□□□□ -1.99
COL11A1P12107 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
COL11A1P12107 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL11A1P12107 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.59□□□□□ -1.99
COL11A1P12107 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL11A1P12107 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL11A1P12107 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.59□□□□□ -1.99
COL11A1P12107 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.59□□□□□ -1.99
COL11A1P12107 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.59□□□□□ -1.99
COL11A1P12107 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.59□□□□□ -1.99
COL11A1P12107 AC069277.2-201ENST00000454211 432 ntBASIC2.59□□□□□ -1.99
COL11A1P12107 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.59□□□□□ -1.99
COL11A1P12107 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.59□□□□□ -1.99
COL11A1P12107 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.59□□□□□ -1.99
COL11A1P12107 AL645944.1-201ENST00000603857 493 ntBASIC2.59□□□□□ -1.99
COL11A1P12107 NF1P10-201ENST00000613227 742 ntBASIC2.59□□□□□ -1.99
COL11A1P12107 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
COL11A1P12107 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.59□□□□□ -1.99
COL11A1P12107 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
COL11A1P12107 AC022336.2-201ENST00000568966 2538 ntBASIC2.59□□□□□ -1.99
COL11A1P12107 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL11A1P12107 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
COL11A1P12107 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.59□□□□□ -2
COL11A1P12107 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
COL11A1P12107 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.58□□□□□ -2
COL11A1P12107 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL11A1P12107 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.58□□□□□ -2
COL11A1P12107 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.58□□□□□ -2
COL11A1P12107 AL354710.1-201ENST00000453641 246 ntBASIC2.58□□□□□ -2
COL11A1P12107 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.58□□□□□ -2
COL11A1P12107 AC087385.1-201ENST00000475062 312 ntBASIC2.58□□□□□ -2
COL11A1P12107 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.58□□□□□ -2
COL11A1P12107 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.58□□□□□ -2
COL11A1P12107 MIR5007-201ENST00000583098 95 ntBASIC2.58□□□□□ -2
COL11A1P12107 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
COL11A1P12107 AC117529.2-201ENST00000512159 2068 ntBASIC2.58□□□□□ -2
COL11A1P12107 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.58□□□□□ -2
COL11A1P12107 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
COL11A1P12107 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
COL11A1P12107 SNORA64-201ENST00000384674 134 ntBASIC2.58□□□□□ -2
COL11A1P12107 CCNB2P1-201ENST00000399411 1150 ntBASIC2.58□□□□□ -2
COL11A1P12107 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
COL11A1P12107 USP9YP7-201ENST00000436723 430 ntBASIC2.58□□□□□ -2
COL11A1P12107 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.58□□□□□ -2
COL11A1P12107 USP9YP32-201ENST00000452432 430 ntBASIC2.58□□□□□ -2
COL11A1P12107 CFTRP1-201ENST00000456646 183 ntBASIC2.58□□□□□ -2
COL11A1P12107 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.58□□□□□ -2
COL11A1P12107 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.58□□□□□ -2
COL11A1P12107 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.58□□□□□ -2
COL11A1P12107 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
COL11A1P12107 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.57□□□□□ -2
COL11A1P12107 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
COL11A1P12107 MTCO1P14-201ENST00000441695 1559 ntBASIC2.57□□□□□ -2
COL11A1P12107 RNU6-532P-201ENST00000384318 107 ntBASIC2.57□□□□□ -2
COL11A1P12107 RPL7P53-201ENST00000421245 739 ntBASIC2.57□□□□□ -2
COL11A1P12107 AC073464.3-201ENST00000422564 712 ntBASIC2.57□□□□□ -2
COL11A1P12107 ISCA1P6-201ENST00000427740 390 ntBASIC2.57□□□□□ -2
COL11A1P12107 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.57□□□□□ -2
COL11A1P12107 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.57□□□□□ -2
COL11A1P12107 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.57□□□□□ -2
COL11A1P12107 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.57□□□□□ -2
COL11A1P12107 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.57□□□□□ -2
COL11A1P12107 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.57□□□□□ -2
COL11A1P12107 AC009831.4-201ENST00000620744 325 ntBASIC2.57□□□□□ -2
COL11A1P12107 AL356266.1-201ENST00000623311 483 ntBASIC2.57□□□□□ -2
COL11A1P12107 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
COL11A1P12107 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
COL11A1P12107 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL11A1P12107 OR5H15-201ENST00000383696 930 ntBASIC2.56□□□□□ -2
COL11A1P12107 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL11A1P12107 AC107081.1-201ENST00000414975 361 ntBASIC2.56□□□□□ -2
COL11A1P12107 AC007390.1-201ENST00000415722 356 ntBASIC2.56□□□□□ -2
COL11A1P12107 TRGV6-201ENST00000417928 299 ntBASIC2.56□□□□□ -2
COL11A1P12107 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.56□□□□□ -2
COL11A1P12107 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms