Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.06□□□□□ -2.08
SPTA1P02549 AP000857.1-201ENST00000532151 543 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 AC092851.1-201ENST00000535964 478 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 PSMA3P-201ENST00000555485 635 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.06□□□□□ -2.08
SPTA1P02549 AL020991.1-201ENST00000612314 373 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 MIR6845-201ENST00000613182 61 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 AC008121.2-201ENST00000614647 523 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPTA1P02549 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPTA1P02549 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.06□□□□□ -2.08
SPTA1P02549 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPTA1P02549 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPTA1P02549 UBE2V1P5-201ENST00000440070 405 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC2.06□□□□□ -2.08
SPTA1P02549 VN1R17P-201ENST00000472048 1090 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.06□□□□□ -2.08
SPTA1P02549 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.06□□□□□ -2.08
SPTA1P02549 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.06□□□□□ -2.08
SPTA1P02549 AC002064.3-201ENST00000623448 346 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SPTA1P02549 MAPK10-266ENST00000641066 6555 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 RNU6-356P-201ENST00000384140 107 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 RNA5SP210-201ENST00000391034 120 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 AC245517.5-201ENST00000611529 162 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 MIR3199-2-201ENST00000636243 86 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SPTA1P02549 Y_RNA.205-201ENST00000364128 113 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 POLR2J4-204ENST00000418424 324 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTA1P02549 RPS4XP11-201ENST00000446897 772 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.05□□□□□ -2.08
SPTA1P02549 SEPT7P3-201ENST00000455017 621 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 AC147055.1-201ENST00000509261 750 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SPTA1P02549 ARL2BPP2-201ENST00000550907 489 ntBASIC2.05□□□□□ -2.08
SPTA1P02549 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTA1P02549 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.05□□□□□ -2.08
SPTA1P02549 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
SPTA1P02549 RPS7P9-201ENST00000414704 586 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 RPS15AP12-201ENST00000419498 388 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 RPS24P8-201ENST00000431490 402 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 CCNHP1-201ENST00000513311 678 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 RNA5SP380-201ENST00000517190 98 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 IGLV3-17-201ENST00000519099 244 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTA1P02549 PHKBP1-201ENST00000450951 1951 ntBASIC2.04□□□□□ -2.08
SPTA1P02549 SNORA67.5-201ENST00000391036 107 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTA1P02549 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTA1P02549 AP001521.1-201ENST00000609150 300 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTA1P02549 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTA1P02549 AP001486.2-201ENST00000561652 5113 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.03□□□□□ -2.08
SPTA1P02549 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTA1P02549 RPS20P25-201ENST00000412447 352 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 AP1B1P2-201ENST00000416196 106 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTA1P02549 AC140059.1-201ENST00000489238 361 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTA1P02549 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.03□□□□□ -2.08
SPTA1P02549 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.03□□□□□ -2.08
SPTA1P02549 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTA1P02549 RMST_2.1-201ENST00000617263 136 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 YWHAEP7-203ENST00000622054 312 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
SPTA1P02549 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTA1P02549 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
SPTA1P02549 FRG1BP-201ENST00000278882 761 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SPTA1P02549 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.02□□□□□ -2.09
SPTA1P02549 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPTA1P02549 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 RNU2-68P-201ENST00000410878 191 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.02□□□□□ -2.09
SPTA1P02549 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTA1P02549 AL390023.1-201ENST00000428836 262 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 NDUFB4P6-201ENST00000436819 366 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTA1P02549 RPS27P29-201ENST00000463110 252 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.02□□□□□ -2.09
SPTA1P02549 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTA1P02549 AL022099.1-201ENST00000604551 712 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 MIR7153-201ENST00000637758 57 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SPTA1P02549 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTA1P02549 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTA1P02549 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTA1P02549 MTCO3P31-201ENST00000405526 789 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTA1P02549 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.02□□□□□ -2.09
SPTA1P02549 AC092798.1-201ENST00000458542 409 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTA1P02549 AP001542.2-201ENST00000593141 364 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 AC004825.2-201ENST00000616634 455 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 AL162233.1-201ENST00000620014 944 ntBASIC2.02□□□□□ -2.09
SPTA1P02549 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms