Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-600P-201ENST00000362524 99 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 RNU6-481P-201ENST00000384194 107 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC000041.1-201ENST00000439655 175 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC011816.1-201ENST00000441346 546 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC104687.1-201ENST00000485829 412 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC121161.1-201ENST00000510606 652 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AP000916.1-201ENST00000533869 835 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 ELOCP31-201ENST00000540463 467 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 EIF4BP1-201ENST00000554881 351 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC018618.2-201ENST00000604770 446 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC006023.2-201ENST00000609916 167 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC084824.5-201ENST00000612009 413 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 AC073348.1-201ENST00000623002 331 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 FAM35BP-202ENST00000497389 3337 ntBASIC3.05□□□□□ -1.92
CTDNEP1O95476 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 MTCO1P4-201ENST00000520516 1409 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC110774.1-201ENST00000623567 2018 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC008432.1-201ENST00000615912 1320 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 RNU6-543P-201ENST00000362576 108 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 USP9YP20-201ENST00000419224 558 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 AL606495.1-201ENST00000422100 813 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 PSMA2P3-201ENST00000429685 675 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTDNEP1O95476 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTDNEP1O95476 BX276092.4-201ENST00000452056 248 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 RPL21P104-201ENST00000464143 478 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 MTCO2P9-201ENST00000503214 694 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 RNU6-334P-201ENST00000517072 102 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC092451.2-201ENST00000538746 658 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTDNEP1O95476 BNIP3P19-201ENST00000605397 577 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTDNEP1O95476 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 AC083865.1-201ENST00000636634 831 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 LRRC77P-213ENST00000637727 880 ntBASIC3.04□□□□□ -1.92
CTDNEP1O95476 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDNEP1O95476 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTDNEP1O95476 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTDNEP1O95476 METTL21EP-201ENST00000298105 713 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 MIR16-2-201ENST00000362117 81 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 SNORA80A-201ENST00000363922 136 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTDNEP1O95476 EIF5P1-201ENST00000400019 1231 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 RNU2-52P-201ENST00000410680 190 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 HMGB3P31-201ENST00000413333 595 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 BX664727.1-201ENST00000416024 466 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 AL512637.2-201ENST00000431287 1256 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 RPL36AP6-201ENST00000435770 321 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC025750.2-201ENST00000442609 450 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 AL096829.2-201ENST00000446582 742 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC108938.1-201ENST00000451204 136 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 RPL32P14-201ENST00000463196 378 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 RPL21P47-201ENST00000483696 477 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC092902.1-201ENST00000486999 259 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC097462.2-201ENST00000504623 481 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 MTND4LP22-201ENST00000508209 276 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 RN7SKP244-201ENST00000516513 307 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 COX6B1P6-201ENST00000522347 255 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 C1DP5-201ENST00000525775 383 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 MTND2P26-201ENST00000528255 1029 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 OR7K1P-201ENST00000546439 926 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms