Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LTN1O94822 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LTN1O94822 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
LTN1O94822 AC117529.2-201ENST00000512159 2068 ntBASIC2.9□□□□□ -1.95
LTN1O94822 Y_RNA.140-201ENST00000363474 103 ntBASIC2.89□□□□□ -1.95
LTN1O94822 Y_RNA.238-201ENST00000364441 102 ntBASIC2.89□□□□□ -1.95
LTN1O94822 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LTN1O94822 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.89□□□□□ -1.95
LTN1O94822 MORF4L1P6-201ENST00000418771 268 ntBASIC2.89□□□□□ -1.95
LTN1O94822 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.89□□□□□ -1.95
LTN1O94822 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.89□□□□□ -1.95
LTN1O94822 OR4R2P-201ENST00000530815 597 ntBASIC2.89□□□□□ -1.95
LTN1O94822 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
LTN1O94822 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LTN1O94822 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LTN1O94822 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.89□□□□□ -1.95
LTN1O94822 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.89□□□□□ -1.95
LTN1O94822 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
LTN1O94822 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
LTN1O94822 DEFA7P-201ENST00000382676 285 ntBASIC2.89□□□□□ -1.95
LTN1O94822 SNORA11.4-201ENST00000408823 129 ntBASIC2.89□□□□□ -1.95
LTN1O94822 Y_RNA.595-201ENST00000410403 105 ntBASIC2.89□□□□□ -1.95
LTN1O94822 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.89□□□□□ -1.95
LTN1O94822 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LTN1O94822 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.89□□□□□ -1.95
LTN1O94822 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.89□□□□□ -1.95
LTN1O94822 AC245517.5-201ENST00000611529 162 ntBASIC2.89□□□□□ -1.95
LTN1O94822 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.89□□□□□ -1.95
LTN1O94822 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LTN1O94822 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
LTN1O94822 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LTN1O94822 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.88□□□□□ -1.95
LTN1O94822 AL353093.1-201ENST00000441292 436 ntBASIC2.88□□□□□ -1.95
LTN1O94822 AC243772.1-201ENST00000451620 410 ntBASIC2.88□□□□□ -1.95
LTN1O94822 TRBV26-201ENST00000456572 344 ntBASIC2.88□□□□□ -1.95
LTN1O94822 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.88□□□□□ -1.95
LTN1O94822 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.88□□□□□ -1.95
LTN1O94822 AP001004.1-201ENST00000582468 324 ntBASIC2.88□□□□□ -1.95
LTN1O94822 AC048347.1-201ENST00000624621 427 ntBASIC2.88□□□□□ -1.95
LTN1O94822 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LTN1O94822 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
LTN1O94822 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.87□□□□□ -1.95
LTN1O94822 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LTN1O94822 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
LTN1O94822 SNORA17.3-201ENST00000391159 129 ntBASIC2.87□□□□□ -1.95
LTN1O94822 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.87□□□□□ -1.95
LTN1O94822 AC026412.2-201ENST00000512270 1075 ntBASIC2.87□□□□□ -1.95
LTN1O94822 AC010265.1-201ENST00000513509 211 ntBASIC2.87□□□□□ -1.95
LTN1O94822 MTCYBP28-201ENST00000566728 1132 ntBASIC2.87□□□□□ -1.95
LTN1O94822 CYP3A51P-201ENST00000633513 256 ntBASIC2.87□□□□□ -1.95
LTN1O94822 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LTN1O94822 DYNLT3P1-201ENST00000378574 347 ntBASIC2.87□□□□□ -1.95
LTN1O94822 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
LTN1O94822 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.87□□□□□ -1.95
LTN1O94822 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.87□□□□□ -1.95
LTN1O94822 RN7SKP210-201ENST00000459176 261 ntBASIC2.87□□□□□ -1.95
LTN1O94822 RPL23AP44-201ENST00000482216 473 ntBASIC2.87□□□□□ -1.95
LTN1O94822 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
LTN1O94822 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.87□□□□□ -1.95
LTN1O94822 AC005951.1-201ENST00000576706 485 ntBASIC2.87□□□□□ -1.95
LTN1O94822 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.87□□□□□ -1.95
LTN1O94822 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
LTN1O94822 VN1R7P-201ENST00000619242 903 ntBASIC2.87□□□□□ -1.95
LTN1O94822 CU459211.1-201ENST00000635667 749 ntBASIC2.87□□□□□ -1.95
LTN1O94822 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.87□□□□□ -1.95
LTN1O94822 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LTN1O94822 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
LTN1O94822 AC025125.1-201ENST00000624743 1922 ntBASIC2.86□□□□□ -1.95
LTN1O94822 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
LTN1O94822 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
LTN1O94822 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LTN1O94822 AC080128.1-201ENST00000474389 1917 ntBASIC2.86□□□□□ -1.95
LTN1O94822 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LTN1O94822 RNU1-138P-201ENST00000384093 164 ntBASIC2.86□□□□□ -1.95
LTN1O94822 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LTN1O94822 AL592045.1-201ENST00000429867 352 ntBASIC2.86□□□□□ -1.95
LTN1O94822 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.86□□□□□ -1.95
LTN1O94822 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.86□□□□□ -1.95
LTN1O94822 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LTN1O94822 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.86□□□□□ -1.95
LTN1O94822 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.86□□□□□ -1.95
LTN1O94822 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.86□□□□□ -1.95
LTN1O94822 AC244517.12-201ENST00000623581 663 ntBASIC2.86□□□□□ -1.95
LTN1O94822 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LTN1O94822 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.85□□□□□ -1.95
LTN1O94822 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LTN1O94822 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.85□□□□□ -1.95
LTN1O94822 AC011155.1-201ENST00000316512 456 ntBASIC2.85□□□□□ -1.95
LTN1O94822 RN7SKP282-201ENST00000516824 299 ntBASIC2.85□□□□□ -1.95
LTN1O94822 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.85□□□□□ -1.95
LTN1O94822 MTND5P29-201ENST00000458676 1807 ntBASIC2.85□□□□□ -1.95
LTN1O94822 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LTN1O94822 Y_RNA.164-201ENST00000363709 102 ntBASIC2.84□□□□□ -1.95
LTN1O94822 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LTN1O94822 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LTN1O94822 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.95
LTN1O94822 SNORA48.3-201ENST00000391081 134 ntBASIC2.84□□□□□ -1.95
LTN1O94822 SAR1AP2-201ENST00000392696 594 ntBASIC2.84□□□□□ -1.95
LTN1O94822 DHFRP5-201ENST00000406944 564 ntBASIC2.84□□□□□ -1.95
LTN1O94822 RN7SKP123-201ENST00000410732 291 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms