Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.35□□□□□ -1.55
SRGAP3O43295 AC002456.2-201ENST00000509356 380 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC008958.1-201ENST00000511047 682 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC021146.3-201ENST00000511911 260 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC008562.1-201ENST00000521763 330 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AP003034.1-201ENST00000534621 422 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC107954.1-201ENST00000565906 727 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AL161729.3-201ENST00000603533 673 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC007621.1-201ENST00000604544 437 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SRGAP3O43295 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.35□□□□□ -1.55
SRGAP3O43295 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.35□□□□□ -1.55
SRGAP3O43295 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SRGAP3O43295 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SRGAP3O43295 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SRGAP3O43295 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.35□□□□□ -1.55
SRGAP3O43295 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SRGAP3O43295 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SRGAP3O43295 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SRGAP3O43295 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SRGAP3O43295 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.34□□□□□ -1.55
SRGAP3O43295 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 RNU1-14P-201ENST00000362759 152 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AC068538.1-201ENST00000376856 336 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 RNU6-769P-201ENST00000384407 104 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SRGAP3O43295 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 RPL6P29-201ENST00000414863 865 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 COX6CP17-201ENST00000421389 185 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 EIF1P3-201ENST00000423841 334 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AL589872.1-201ENST00000426602 288 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 CEACAMP1-201ENST00000434624 1035 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 RPL7P54-201ENST00000438336 674 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 RN7SL41P-201ENST00000476144 297 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 RPL21P6-201ENST00000479171 504 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.34□□□□□ -1.55
SRGAP3O43295 RNA5SP519-201ENST00000516480 119 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AC134698.5-201ENST00000519444 336 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.34□□□□□ -1.55
SRGAP3O43295 HSPA8P13-201ENST00000523715 472 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AL109766.1-201ENST00000555080 552 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 RN7SL176P-201ENST00000580352 264 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 MIR3939-201ENST00000582614 106 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AC011712.1-201ENST00000588959 234 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AC022432.1-201ENST00000595739 310 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 BCRP9-201ENST00000605312 388 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AL136363.1-201ENST00000605349 337 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 ARF4P1-201ENST00000605447 541 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 MIR98-201ENST00000606724 119 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 uc_338.9-201ENST00000617424 182 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.34□□□□□ -1.55
SRGAP3O43295 MIR6830-201ENST00000636015 70 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AC008013.2-202ENST00000637965 364 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SRGAP3O43295 AC107021.2-201ENST00000567714 2095 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 AC000123.3-201ENST00000624029 4975 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 CASC19-284ENST00000642142 1868 ntBASIC5.34□□□□□ -1.55
SRGAP3O43295 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SRGAP3O43295 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SRGAP3O43295 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SRGAP3O43295 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
SRGAP3O43295 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SRGAP3O43295 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
SRGAP3O43295 Y_RNA.72-201ENST00000362894 103 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 Y_RNA.481-201ENST00000384373 102 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 MIR1305-201ENST00000408300 86 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RN7SKP266-201ENST00000410232 287 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RNU2-6P-201ENST00000411404 190 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 SDCBPP2-201ENST00000424643 885 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC234779.1-201ENST00000425910 285 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AL031663.1-201ENST00000437445 219 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 CBX1P4-201ENST00000439415 457 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RPL17P49-201ENST00000443728 411 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC073587.1-201ENST00000447093 876 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 RPL23AP20-201ENST00000447965 421 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 ABCF2P2-201ENST00000450549 296 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC009963.2-201ENST00000453431 138 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RPL23AP81-201ENST00000455252 467 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RNU6-420P-201ENST00000458780 107 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RPS20P20-201ENST00000460498 340 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms