Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8□□□□□ -1.13
VGFO15240 AL158032.1-201ENST00000605401 106 ntBASIC8□□□□□ -1.13
VGFO15240 AL589994.2-201ENST00000621124 579 ntBASIC8□□□□□ -1.13
VGFO15240 AC130454.1-201ENST00000622948 401 ntBASIC8□□□□□ -1.13
VGFO15240 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8□□□□□ -1.13
VGFO15240 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8□□□□□ -1.13
VGFO15240 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
VGFO15240 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8□□□□□ -1.13
VGFO15240 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
VGFO15240 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
VGFO15240 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.99□□□□□ -1.13
VGFO15240 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 RNU6-280P-201ENST00000364145 104 ntBASIC7.99□□□□□ -1.13
VGFO15240 RNU6-338P-201ENST00000383888 105 ntBASIC7.99□□□□□ -1.13
VGFO15240 RNU6-187P-201ENST00000384139 106 ntBASIC7.99□□□□□ -1.13
VGFO15240 AL133270.1-201ENST00000402635 279 ntBASIC7.99□□□□□ -1.13
VGFO15240 PPIAP9-201ENST00000403866 498 ntBASIC7.99□□□□□ -1.13
VGFO15240 RN7SKP125-201ENST00000410481 302 ntBASIC7.99□□□□□ -1.13
VGFO15240 RN7SKP213-201ENST00000410746 298 ntBASIC7.99□□□□□ -1.13
VGFO15240 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.99□□□□□ -1.13
VGFO15240 RPL7P2-201ENST00000427639 268 ntBASIC7.99□□□□□ -1.13
VGFO15240 AL031274.1-201ENST00000450334 232 ntBASIC7.99□□□□□ -1.13
VGFO15240 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC7.99□□□□□ -1.13
VGFO15240 TRBV5-2-201ENST00000489095 273 ntBASIC7.99□□□□□ -1.13
VGFO15240 AC135721.1-201ENST00000497954 479 ntBASIC7.99□□□□□ -1.13
VGFO15240 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.99□□□□□ -1.13
VGFO15240 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.99□□□□□ -1.13
VGFO15240 AP001922.4-201ENST00000526967 290 ntBASIC7.99□□□□□ -1.13
VGFO15240 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.99□□□□□ -1.13
VGFO15240 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC7.99□□□□□ -1.13
VGFO15240 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC7.99□□□□□ -1.13
VGFO15240 AC006600.1-201ENST00000572529 153 ntBASIC7.99□□□□□ -1.13
VGFO15240 RN7SL708P-201ENST00000580952 299 ntBASIC7.99□□□□□ -1.13
VGFO15240 AC004792.1-201ENST00000614523 137 ntBASIC7.99□□□□□ -1.13
VGFO15240 AC241377.1-201ENST00000619797 406 ntBASIC7.99□□□□□ -1.13
VGFO15240 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.99□□□□□ -1.13
VGFO15240 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
VGFO15240 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VGFO15240 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VGFO15240 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
VGFO15240 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
VGFO15240 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VGFO15240 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
VGFO15240 RNU6-662P-201ENST00000384253 104 ntBASIC7.98□□□□□ -1.13
VGFO15240 MIR517A-201ENST00000385001 87 ntBASIC7.98□□□□□ -1.13
VGFO15240 RNA5SP339-201ENST00000390987 122 ntBASIC7.98□□□□□ -1.13
VGFO15240 RNU6-1156P-201ENST00000410365 100 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL158071.1-201ENST00000430315 461 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL645568.3-201ENST00000433683 316 ntBASIC7.98□□□□□ -1.13
VGFO15240 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VGFO15240 PPIAP3-201ENST00000450588 505 ntBASIC7.98□□□□□ -1.13
VGFO15240 CREM-226ENST00000469949 721 ntTSL 3 BASIC7.98□□□□□ -1.13
VGFO15240 AC006511.1-201ENST00000470614 315 ntBASIC7.98□□□□□ -1.13
VGFO15240 RPSAP50-201ENST00000481955 852 ntBASIC7.98□□□□□ -1.13
VGFO15240 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC7.98□□□□□ -1.13
VGFO15240 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VGFO15240 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC7.98□□□□□ -1.13
VGFO15240 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.98□□□□□ -1.13
VGFO15240 AC090517.1-201ENST00000569307 266 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL670379.6-201ENST00000603753 252 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL670379.1-201ENST00000604752 252 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL670379.5-201ENST00000605253 252 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL670379.8-201ENST00000605353 252 ntBASIC7.98□□□□□ -1.13
VGFO15240 AL670379.7-201ENST00000605823 252 ntBASIC7.98□□□□□ -1.13
VGFO15240 AC126915.2-201ENST00000610957 190 ntBASIC7.98□□□□□ -1.13
VGFO15240 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VGFO15240 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
VGFO15240 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VGFO15240 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
VGFO15240 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
VGFO15240 U3.2-201ENST00000362981 210 ntBASIC7.97□□□□□ -1.13
VGFO15240 RN7SKP115-201ENST00000363177 317 ntBASIC7.97□□□□□ -1.13
VGFO15240 SNORD1C-201ENST00000363315 78 ntBASIC7.97□□□□□ -1.13
VGFO15240 SNORA51.11-201ENST00000384442 131 ntBASIC7.97□□□□□ -1.13
VGFO15240 AC073410.1-201ENST00000435125 589 ntBASIC7.97□□□□□ -1.13
VGFO15240 AC092647.2-201ENST00000452998 253 ntBASIC7.97□□□□□ -1.13
VGFO15240 RNU6-1218P-201ENST00000458990 108 ntBASIC7.97□□□□□ -1.13
VGFO15240 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.97□□□□□ -1.13
VGFO15240 RPL7AP6-201ENST00000477943 801 ntBASIC7.97□□□□□ -1.13
VGFO15240 AP003733.2-201ENST00000529409 171 ntBASIC7.97□□□□□ -1.13
VGFO15240 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.97□□□□□ -1.13
VGFO15240 AC130289.1-201ENST00000577321 73 ntBASIC7.97□□□□□ -1.13
VGFO15240 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms