Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.21□□□□□ -1.9
CDX4O14627 RHOT1P2-201ENST00000366423 333 ntBASIC3.21□□□□□ -1.9
CDX4O14627 SNORD116-12-201ENST00000384468 92 ntBASIC3.21□□□□□ -1.9
CDX4O14627 MIR513B-201ENST00000385136 84 ntBASIC3.21□□□□□ -1.9
CDX4O14627 RNU6-1242P-201ENST00000391052 103 ntBASIC3.21□□□□□ -1.9
CDX4O14627 SSXP10-201ENST00000402595 565 ntBASIC3.21□□□□□ -1.9
CDX4O14627 ZNF603P-201ENST00000405613 487 ntBASIC3.21□□□□□ -1.9
CDX4O14627 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CDX4O14627 RNU4-22P-201ENST00000411058 166 ntBASIC3.21□□□□□ -1.9
CDX4O14627 JKAMPP1-201ENST00000413804 919 ntBASIC3.21□□□□□ -1.9
CDX4O14627 MTCO2P21-201ENST00000419780 677 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.21□□□□□ -1.9
CDX4O14627 RPP40P1-201ENST00000426762 456 ntBASIC3.21□□□□□ -1.9
CDX4O14627 RAC1P8-201ENST00000427086 527 ntBASIC3.21□□□□□ -1.9
CDX4O14627 PSMA2P3-201ENST00000429685 675 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 AL356535.1-201ENST00000440335 398 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.21□□□□□ -1.9
CDX4O14627 AL034418.1-201ENST00000448675 860 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 RPS20P32-201ENST00000456044 356 ntBASIC3.21□□□□□ -1.9
CDX4O14627 PNPLA4P1-201ENST00000458328 305 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AP000873.1-201ENST00000463987 400 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 RNF138P1-201ENST00000502765 546 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.21□□□□□ -1.9
CDX4O14627 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.21□□□□□ -1.9
CDX4O14627 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 MTND2P26-201ENST00000528255 1029 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 DUXAP6-201ENST00000553858 601 ntBASIC3.21□□□□□ -1.9
CDX4O14627 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.21□□□□□ -1.9
CDX4O14627 MIR3912-201ENST00000577566 105 ntBASIC3.21□□□□□ -1.9
CDX4O14627 MIR3162-201ENST00000581818 82 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC245036.5-201ENST00000596330 847 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC113368.1-201ENST00000603736 382 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC009237.15-201ENST00000610252 501 ntBASIC3.21□□□□□ -1.9
CDX4O14627 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CDX4O14627 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDX4O14627 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.21□□□□□ -1.9
CDX4O14627 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.21□□□□□ -1.9
CDX4O14627 AC022079.1-201ENST00000621546 602 ntBASIC3.21□□□□□ -1.9
CDX4O14627 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.21□□□□□ -1.9
CDX4O14627 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.21□□□□□ -1.9
CDX4O14627 MTND2P41-201ENST00000637599 773 ntBASIC3.21□□□□□ -1.9
CDX4O14627 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDX4O14627 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDX4O14627 ELL2P4-201ENST00000446870 1376 ntBASIC3.21□□□□□ -1.9
CDX4O14627 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDX4O14627 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.2□□□□□ -1.9
CDX4O14627 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDX4O14627 AC099786.3-201ENST00000565735 1410 ntBASIC3.2□□□□□ -1.9
CDX4O14627 CR383658.2-201ENST00000547576 1525 ntBASIC3.2□□□□□ -1.9
CDX4O14627 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDX4O14627 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDX4O14627 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDX4O14627 RNU6-582P-201ENST00000362989 107 ntBASIC3.2□□□□□ -1.9
CDX4O14627 RNU6-1243P-201ENST00000364028 107 ntBASIC3.2□□□□□ -1.9
CDX4O14627 RNU6-707P-201ENST00000364647 95 ntBASIC3.2□□□□□ -1.9
CDX4O14627 RNU6-356P-201ENST00000384140 107 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AL133264.1-201ENST00000407157 562 ntBASIC3.2□□□□□ -1.9
CDX4O14627 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.2□□□□□ -1.9
CDX4O14627 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 RPL36P19-201ENST00000430744 301 ntBASIC3.2□□□□□ -1.9
CDX4O14627 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 AC241584.1-201ENST00000438469 1241 ntBASIC3.2□□□□□ -1.9
CDX4O14627 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.2□□□□□ -1.9
CDX4O14627 USP9YP22-201ENST00000438971 294 ntBASIC3.2□□□□□ -1.9
CDX4O14627 CR769776.1-201ENST00000441254 787 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.2□□□□□ -1.9
CDX4O14627 ATP5C1P1-201ENST00000441945 895 ntBASIC3.2□□□□□ -1.9
CDX4O14627 Z73417.1-201ENST00000447373 778 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC112492.1-201ENST00000449607 712 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.2□□□□□ -1.9
CDX4O14627 ZNF886P-201ENST00000450781 723 ntBASIC3.2□□□□□ -1.9
CDX4O14627 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.2□□□□□ -1.9
CDX4O14627 BX276092.4-201ENST00000452056 248 ntBASIC3.2□□□□□ -1.9
CDX4O14627 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 PTGES3P5-201ENST00000455109 434 ntBASIC3.2□□□□□ -1.9
CDX4O14627 DNAJC19P1-201ENST00000455312 319 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 AL133477.1-201ENST00000457472 514 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.2□□□□□ -1.9
CDX4O14627 OR2A20P-203ENST00000498397 1268 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 RNU6-885P-201ENST00000516607 104 ntBASIC3.2□□□□□ -1.9
CDX4O14627 RN7SKP277-201ENST00000516895 283 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AP001636.2-201ENST00000525517 696 ntBASIC3.2□□□□□ -1.9
CDX4O14627 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.2□□□□□ -1.9
CDX4O14627 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.2□□□□□ -1.9
CDX4O14627 AC092851.1-201ENST00000535964 478 ntBASIC3.2□□□□□ -1.9
CDX4O14627 RFPL1S-203ENST00000539579 330 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
CDX4O14627 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.2□□□□□ -1.9
CDX4O14627 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX4O14627 NIFKP6-201ENST00000598115 845 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms