Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC055876.1-202ENST00000567053 138 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AL390838.2-201ENST00000602394 274 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AL160237.3-201ENST00000604114 1013 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC069545.1-201ENST00000605671 358 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AL159169.3-201ENST00000608871 561 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 DUXAP10-204ENST00000612052 616 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AL138478.1-201ENST00000612252 832 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC005332.6-201ENST00000613178 446 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC039056.2-201ENST00000622261 511 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AL161637.1-201ENST00000622380 412 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 LINC02211-204ENST00000642024 1070 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.32□□□□□ -1.88
PDLIM1O00151 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
PDLIM1O00151 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM1O00151 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM1O00151 RNU6-657P-201ENST00000383904 107 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 SNORA40.2-201ENST00000390847 128 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDLIM1O00151 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AC106883.1-201ENST00000418805 562 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AL357552.1-201ENST00000445254 415 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 ARL4AP2-201ENST00000507378 601 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 SAP18P1-201ENST00000512058 390 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AC027309.2-201ENST00000520566 192 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AC109635.4-202ENST00000531666 412 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM1O00151 MTCO2P2-201ENST00000591258 225 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AC091946.2-201ENST00000606105 291 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
PDLIM1O00151 AC024257.5-201ENST00000612739 531 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AL121772.2-201ENST00000614331 297 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AC034229.5-201ENST00000624258 185 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM1O00151 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM1O00151 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM1O00151 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM1O00151 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM1O00151 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM1O00151 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
PDLIM1O00151 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PDLIM1O00151 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM1O00151 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM1O00151 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 Y_RNA.25-201ENST00000362528 102 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 SNORD82-201ENST00000365530 70 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 SNORA51.6-201ENST00000384151 125 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC007066.1-201ENST00000392902 381 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 MTND4LP20-201ENST00000402379 270 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 RNU6ATAC-201ENST00000408749 126 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AL161449.1-201ENST00000414531 1199 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AL035246.1-201ENST00000433554 1255 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC127537.2-201ENST00000439258 465 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC004854.1-201ENST00000440356 349 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.3□□□□□ -1.88
PDLIM1O00151 EEF1A1P39-201ENST00000440791 250 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 OR10R1P-201ENST00000441524 1141 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 COX6CP2-201ENST00000444980 225 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC004022.1-201ENST00000447766 1066 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AL589880.1-201ENST00000448271 287 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC010655.1-201ENST00000449336 292 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 KLRA1P-201ENST00000503499 986 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC093767.1-201ENST00000504523 156 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.3□□□□□ -1.88
PDLIM1O00151 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.3□□□□□ -1.88
PDLIM1O00151 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms