Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL356473.1-201ENST00000406203 1408 ntBASIC3.43□□□□□ -1.86
NPIPA3F8WFD2 AL022578.1-201ENST00000439330 1433 ntBASIC3.43□□□□□ -1.86
NPIPA3F8WFD2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA3F8WFD2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPIPA3F8WFD2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL133383.2-201ENST00000622958 2336 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 SNORA31-201ENST00000362607 130 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RNU6-1214P-201ENST00000363650 109 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 SNORA4.1-201ENST00000364263 144 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 SNORA70.4-201ENST00000365509 134 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 MIR607-201ENST00000385241 96 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RNU6-952P-201ENST00000391164 108 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RNA5SP44-201ENST00000410446 133 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RNU2-47P-201ENST00000410649 186 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 TPMTP2-201ENST00000414372 726 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC093578.1-201ENST00000415219 368 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC245052.5-201ENST00000416320 649 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 ZYG11AP1-201ENST00000430329 837 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 MTND4LP10-201ENST00000435146 291 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL356535.1-201ENST00000440335 398 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 SETD6P1-201ENST00000444575 317 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 CFTRP1-201ENST00000456646 183 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 snoU109.4-201ENST00000458953 143 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC092451.1-201ENST00000480211 153 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RPS26P15-201ENST00000488067 348 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 HMGB1P22-201ENST00000505315 124 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC104619.4-201ENST00000510773 249 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC010342.1-201ENST00000514047 877 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 RN7SKP244-201ENST00000516513 307 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 MIR5186-201ENST00000577504 120 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC007687.1-201ENST00000602704 304 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC010738.1-201ENST00000604970 987 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC012531.5-201ENST00000611375 151 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC012314.7-201ENST00000619693 93 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC079228.1-201ENST00000624774 1049 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AP001350.1-201ENST00000601906 1524 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL049780.3-201ENST00000624612 1583 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
NPIPA3F8WFD2 AC097714.1-201ENST00000511272 1647 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 RPL23AP57-201ENST00000332361 466 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 SNORA63.1-201ENST00000362493 131 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 RNA5SP119-201ENST00000362715 117 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 RNA5SP387-201ENST00000364226 106 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 MIR23A-201ENST00000385245 73 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC007066.1-201ENST00000392902 381 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 RPS29P4-201ENST00000414733 161 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 MTCO3P12-201ENST00000416718 547 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 RPL21P66-201ENST00000426566 466 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 HMGN2P31-201ENST00000432430 273 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 MTCYBP45-201ENST00000435243 565 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 EEF1E1P1-201ENST00000446998 430 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 ARPC3P5-201ENST00000448802 534 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 MTND2P19-201ENST00000449129 1012 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 BX322784.1-201ENST00000455793 1077 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 snoU13.24-201ENST00000458998 104 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 MEMO1P3-201ENST00000459811 302 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms