Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC097714.1-201ENST00000511272 1647 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A5A8TX70 Y_RNA.191-201ENST00000363972 113 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A5A8TX70 RPS12P23-201ENST00000419579 400 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 AC103975.1-201ENST00000482506 483 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 AC025881.1-201ENST00000518851 512 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 HMGB1P1-201ENST00000522557 636 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 AP001542.2-201ENST00000593141 364 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 AC016590.3-201ENST00000611171 753 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 AC121761.2-201ENST00000617300 689 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.8□□□□□ -2.12
COL6A5A8TX70 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
COL6A5A8TX70 AC107021.2-201ENST00000567714 2095 ntBASIC1.8□□□□□ -2.12
COL6A5A8TX70 AL353743.4-201ENST00000422653 1547 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 API5P2-201ENST00000397055 1498 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 TEX21P-201ENST00000447107 1476 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 AC138915.3-201ENST00000562908 1389 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 RPL9P7-201ENST00000330965 580 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 SNORA67.3-201ENST00000384366 140 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 AC073136.2-201ENST00000417282 849 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 AC013410.1-201ENST00000436223 1232 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 PPIAP17-201ENST00000438507 471 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 AL513321.1-201ENST00000441175 761 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 RPS4XP11-201ENST00000446897 772 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 AC011611.5-201ENST00000552477 578 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 MIR4452-201ENST00000583004 71 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 U7.8-201ENST00000619968 63 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 MIR6734-201ENST00000621166 68 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A5A8TX70 MIR3074-201ENST00000384885 81 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A5A8TX70 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 IGKV2D-23-201ENST00000518179 286 ntBASIC1.79□□□□□ -2.12
COL6A5A8TX70 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.79□□□□□ -2.12
COL6A5A8TX70 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A5A8TX70 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A5A8TX70 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL6A5A8TX70 RNU2-17P-201ENST00000410290 190 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 RPL30P2-201ENST00000414021 291 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 AL158825.1-201ENST00000414735 521 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 MTATP6P11-201ENST00000428071 670 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 AP000936.3-201ENST00000438127 255 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 AC092798.1-201ENST00000458542 409 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 AC016687.1-201ENST00000482574 353 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 AC245166.1-201ENST00000521012 253 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 CRYM-AS1-204ENST00000637983 556 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL6A5A8TX70 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 HSPD1P16-201ENST00000402302 394 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 FAT1P1-201ENST00000406588 507 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 RPS7P9-201ENST00000414704 586 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 AC002553.2-201ENST00000453217 340 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 RPL38P4-201ENST00000502376 214 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 CCNHP1-201ENST00000513311 678 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 MIR5092-201ENST00000583139 88 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 BMS1P7-201ENST00000602440 1052 ntBASIC1.78□□□□□ -2.12
COL6A5A8TX70 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
COL6A5A8TX70 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
COL6A5A8TX70 AL133412.1-201ENST00000380194 2992 ntBASIC1.78□□□□□ -2.13
COL6A5A8TX70 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
COL6A5A8TX70 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 AL606537.1-201ENST00000607258 2011 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 AC080125.1-201ENST00000414888 684 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 RN7SL75P-201ENST00000461926 281 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 MTND3P6-201ENST00000485242 339 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 RNA5SP395-201ENST00000516567 118 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 AC021733.2-201ENST00000518830 497 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.77□□□□□ -2.13
COL6A5A8TX70 AL355836.1-201ENST00000555951 870 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 HMGB3P26-201ENST00000560051 582 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 AC022960.2-201ENST00000616300 666 ntBASIC1.77□□□□□ -2.13
COL6A5A8TX70 OR11H5P-202ENST00000641612 1325 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms