Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AL136363.1-201ENST00000605349 337 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC092954.2-201ENST00000609103 430 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL136313.1-201ENST00000624804 202 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC019226.1-201ENST00000625666 515 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC090337.1-201ENST00000579651 2074 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC108467.2-201ENST00000617640 1597 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL136164.3-201ENST00000624429 3978 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 Z95331.1-201ENST00000623075 23112 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC011755.1-201ENST00000623763 2049 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP447-201ENST00000363749 119 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RN7SKP227-201ENST00000364445 330 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-1074P-201ENST00000383995 104 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 CALM2P3-201ENST00000400429 449 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RNU2-43P-201ENST00000410306 190 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RN7SKP159-201ENST00000410657 292 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 E2F6P2-201ENST00000420708 748 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RWDD4P2-201ENST00000426392 563 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AL162388.1-201ENST00000450912 352 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 SCARNA10-201ENST00000459255 330 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC083829.1-201ENST00000503756 657 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC105914.1-201ENST00000511798 226 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-513P-201ENST00000516104 104 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC011979.2-201ENST00000527568 352 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC018630.1-201ENST00000541376 925 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 CYCSP40-201ENST00000575927 294 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AP005019.3-201ENST00000620418 560 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 OR52H1-202ENST00000641796 1061 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC108751.5-201ENST00000492880 1336 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AL031595.2-201ENST00000624215 19071 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AC105074.1-201ENST00000623380 3095 ntBASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD3L4A6NDZ8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 AL645937.1-201ENST00000641739 1652 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 AC021146.4-201ENST00000309229 279 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 RNU5E-8P-201ENST00000363502 116 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-335P-201ENST00000364563 113 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 Y_RNA.409-201ENST00000383990 98 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-1103P-201ENST00000384150 107 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 SNORD115-47-201ENST00000391226 86 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 AL109755.1-201ENST00000401791 649 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 RPS3AP24-201ENST00000407896 734 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 UBE2FP1-201ENST00000416536 447 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 MTND1P23-201ENST00000416931 372 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 EIF4HP2-201ENST00000424380 563 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 MRPS10P2-201ENST00000431226 381 ntBASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD3L4A6NDZ8 MTATP6P30-201ENST00000443540 664 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms