Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 USP9YP32-201ENST00000452432 430 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ANP32BP2-201ENST00000454525 545 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RN7SL323P-201ENST00000494712 295 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC010625.1-201ENST00000511296 403 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MTCYBP43-201ENST00000513621 740 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-678P-201ENST00000516832 109 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-232P-201ENST00000517144 64 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RAB9BP1-201ENST00000519581 626 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AP006245.1-201ENST00000522549 120 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC053481.3-201ENST00000577881 843 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC110741.2-201ENST00000605278 268 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL390208.1-201ENST00000605885 644 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 MIR6820-201ENST00000611508 62 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL392048.1-201ENST00000613946 534 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AP000553.6-201ENST00000641242 118 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV4-1A0A0J9YWV2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC024560.2-201ENST00000507981 1497 ntBASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 Y_RNA.18-201ENST00000362461 102 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-553P-201ENST00000364047 96 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 Y_RNA.302-201ENST00000364997 102 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNA5SP88-201ENST00000365560 109 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-723P-201ENST00000383973 107 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SNORA70C-201ENST00000384538 135 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-837P-201ENST00000391056 108 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SNORA3.3-201ENST00000408712 125 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL23AP39-201ENST00000415533 405 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MTATP6P27-201ENST00000416987 621 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC019178.2-201ENST00000423595 505 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL158071.1-201ENST00000430315 461 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 UBE2FP3-201ENST00000436366 524 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MTCO1P27-201ENST00000448269 226 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR6C5P-201ENST00000452388 923 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BX322784.1-201ENST00000455793 1077 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ARPC3P2-201ENST00000457786 533 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BZW1P2-201ENST00000473537 826 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPL30P6-201ENST00000475925 342 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC005178.1-201ENST00000508392 440 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC108064.1-201ENST00000513791 460 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC087276.1-201ENST00000529659 480 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL606490.9-201ENST00000603331 271 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL365503.1-201ENST00000605247 905 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL592295.2-201ENST00000612578 206 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL596245.1-201ENST00000618994 362 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC078883.4-201ENST00000623218 367 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL732618.1-201ENST00000623251 301 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PCMTD1P7-201ENST00000634506 357 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC099063.3-201ENST00000642066 185 ntBASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms