Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC008897.1-201ENST00000494006 347 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC135721.1-201ENST00000497954 479 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 HMGB3P16-201ENST00000508037 287 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC091868.1-201ENST00000508746 304 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 IGKV1-32-201ENST00000519290 311 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 MTND1P35-201ENST00000526739 508 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC098848.2-201ENST00000588023 330 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC006254.3-201ENST00000603353 884 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC007621.1-201ENST00000604544 437 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AP001330.5-201ENST00000607176 411 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC093788.1-201ENST00000609356 927 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC022306.2-201ENST00000617563 647 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL161637.1-201ENST00000622380 412 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 TLK1P1-201ENST00000456760 2440 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL442639.1-201ENST00000625030 1899 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL136164.3-201ENST00000624429 3978 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 MTND5P3-201ENST00000438536 1800 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 CR848007.1-201ENST00000442354 1699 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 SNORD56.2-201ENST00000363242 71 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNVU1-6-201ENST00000364688 164 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-867P-201ENST00000364956 107 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 Y_RNA.303-201ENST00000364998 94 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-39P-201ENST00000384344 107 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 Y_RNA.573-201ENST00000384763 105 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 MIR124-3-201ENST00000384866 87 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 MIR192-201ENST00000384915 110 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 MIR1-2-201ENST00000384961 85 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU1-82P-201ENST00000390851 165 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL359643.1-201ENST00000404109 423 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL583834.1-201ENST00000406943 343 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AMD1P2-201ENST00000412936 992 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPL26P29-201ENST00000415623 438 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL590139.1-201ENST00000416267 400 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 CCDC58P2-201ENST00000417131 366 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 UQCRBP1-201ENST00000421129 336 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 BEND7P1-201ENST00000422058 457 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RGS17P1-201ENST00000423358 553 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 FABP7P2-201ENST00000429946 379 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC016712.1-201ENST00000431088 378 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPL34P6-201ENST00000432390 345 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 HMGB3P12-201ENST00000438745 556 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL138799.3-201ENST00000438968 350 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 DPPA3P1-201ENST00000448050 469 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC140076.1-201ENST00000449897 361 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC068305.1-201ENST00000497406 726 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 SCARNA22-201ENST00000503991 125 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-1095P-201ENST00000516148 108 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-1281P-201ENST00000516223 105 ntBASIC3.44□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms