Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 UNC93B2-201ENST00000285383 730 ntBASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHB1Q9Y5F3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 AP002982.1-201ENST00000492365 877 ntBASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 LINC01568-207ENST00000641790 1380 ntBASIC19.19■□□□□ 0.66
PCDHB1Q9Y5F3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 AL390955.1-201ENST00000428694 934 ntBASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB1Q9Y5F3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 AC104417.2-201ENST00000562989 1793 ntBASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 AC113347.1-201ENST00000413321 391 ntBASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 C1QL1P1-201ENST00000568105 661 ntBASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB1Q9Y5F3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB1Q9Y5F3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms