Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC52A1Q9NWF4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC27.51■■■□□ 2
SLC52A1Q9NWF4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC27.51■■■□□ 2
SLC52A1Q9NWF4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 AC004870.1-201ENST00000315132 882 ntBASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 SEC1P-202ENST00000473944 940 ntBASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 UNC93B7-201ENST00000509439 705 ntBASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 KRT8P26-201ENST00000534154 1276 ntBASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 AL162741.1-201ENST00000565563 1558 ntBASIC27.51■■□□□ 1.99
SLC52A1Q9NWF4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AL845331.1-201ENST00000424978 1190 ntBASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AC079602.3-201ENST00000623931 403 ntBASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AC093525.10-201ENST00000625130 1569 ntBASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC27.5■■□□□ 1.99
SLC52A1Q9NWF4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 AC036111.1-201ENST00000533973 1582 ntBASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 MIR3180-5-201ENST00000583743 153 ntBASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SLC52A1Q9NWF4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 AP002414.4-201ENST00000589764 1148 ntBASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SLC52A1Q9NWF4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 GRAMD4P1-201ENST00000435181 1110 ntBASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC52A1Q9NWF4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 MIR662-201ENST00000384847 95 ntBASIC27.46■■□□□ 1.99
SLC52A1Q9NWF4 CHCHD2P8-201ENST00000429873 447 ntBASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms