Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CISHQ9NSE2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 AL355355.2-201ENST00000442321 338 ntBASIC20.48■□□□□ 0.87
CISHQ9NSE2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 AC116562.2-201ENST00000507042 360 ntBASIC20.48■□□□□ 0.87
CISHQ9NSE2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CISHQ9NSE2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CISHQ9NSE2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CISHQ9NSE2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CISHQ9NSE2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CISHQ9NSE2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CISHQ9NSE2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 TSPY21P-201ENST00000433481 731 ntBASIC20.47■□□□□ 0.87
CISHQ9NSE2 TSPY23P-201ENST00000440136 739 ntBASIC20.47■□□□□ 0.87
CISHQ9NSE2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 REXO1L10P-201ENST00000615707 1290 ntBASIC20.47■□□□□ 0.87
CISHQ9NSE2 REXO1L12P-201ENST00000622156 912 ntBASIC20.47■□□□□ 0.87
CISHQ9NSE2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CISHQ9NSE2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CISHQ9NSE2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CISHQ9NSE2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 AP003071.4-201ENST00000562276 1284 ntBASIC20.46■□□□□ 0.87
CISHQ9NSE2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 MIR4497-201ENST00000583208 89 ntBASIC20.46■□□□□ 0.87
CISHQ9NSE2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CISHQ9NSE2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.46■□□□□ 0.87
CISHQ9NSE2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CISHQ9NSE2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CISHQ9NSE2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
CISHQ9NSE2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CISHQ9NSE2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.45■□□□□ 0.86
CISHQ9NSE2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.45■□□□□ 0.86
CISHQ9NSE2 MIR4785-201ENST00000585005 73 ntBASIC20.45■□□□□ 0.86
CISHQ9NSE2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.45■□□□□ 0.86
CISHQ9NSE2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.45■□□□□ 0.86
CISHQ9NSE2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CISHQ9NSE2 KRT8P11-201ENST00000409686 1436 ntBASIC20.44■□□□□ 0.86
CISHQ9NSE2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms