Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 Y_RNA.169-201ENST00000363745 96 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 OR6C69P-201ENST00000394268 893 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC211485.1-201ENST00000417100 1107 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC073387.1-201ENST00000453261 709 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 PRELID3BP6-201ENST00000503839 571 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC118282.2-201ENST00000508739 374 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC01099-203ENST00000514736 758 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 DCN-207ENST00000546370 586 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 GLRXP2-201ENST00000555594 321 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC103988.2-201ENST00000561804 725 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC007346.2-201ENST00000564816 892 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 RSL24D1P11-201ENST00000591045 491 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC004801.6-201ENST00000616571 978 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 QRSL1P2-201ENST00000418582 964 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC010099.3-201ENST00000423896 409 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 GAPDHP46-201ENST00000424043 994 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 MTCO2P11-201ENST00000431069 680 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC092641.1-201ENST00000440229 772 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC114755.5-201ENST00000447760 831 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC117532.1-201ENST00000514638 323 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 STX17-AS1-201ENST00000529965 548 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 EIF1AXP2-201ENST00000555940 413 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC012146.3-201ENST00000574352 490 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC024075.1-201ENST00000596816 546 ntTSL 4 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC113368.1-201ENST00000603736 382 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC244517.2-201ENST00000607216 587 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC110741.3-201ENST00000611983 659 ntBASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC024475.3-205ENST00000634991 481 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 AC073072.1-201ENST00000325042 1364 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 PLCE1-AS1-201ENST00000425267 1370 ntTSL 3 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
KRTAP3-3Q9BYR6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AC010132.4-201ENST00000569883 1368 ntBASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KRTAP3-3Q9BYR6 AL121952.1-201ENST00000404382 547 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms