Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
KRTAP9-3Q9BYQ3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AF106564.1-201ENST00000607058 2553 ntBASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AL121672.3-201ENST00000608644 468 ntBASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC109809.1-201ENST00000619665 545 ntBASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 AP001271.2-201ENST00000624018 1556 ntBASIC8.78□□□□□ -1
KRTAP9-3Q9BYQ3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC8.77□□□□□ -1
KRTAP9-3Q9BYQ3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
KRTAP9-3Q9BYQ3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC8.77□□□□□ -1
KRTAP9-3Q9BYQ3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 TSPY19P-201ENST00000418461 509 ntBASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 TSPY18P-201ENST00000441642 509 ntBASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 BX276092.5-203ENST00000456199 560 ntBASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 EMBP1-201ENST00000458200 901 ntBASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AC063950.1-202ENST00000600133 568 ntBASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 WWC2-AS2-201ENST00000578387 2183 ntBASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP9-3Q9BYQ3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms