Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 AC005332.3-201ENST00000589904 676 ntBASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRFN3Q9BTN0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 MIR770-201ENST00000390219 98 ntBASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 AC211486.1-202ENST00000416371 468 ntBASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 PAWRP1-201ENST00000451083 565 ntBASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 AC211476.1-201ENST00000503899 468 ntBASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 AC008608.2-201ENST00000606089 416 ntBASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 AL596442.2-201ENST00000610240 980 ntBASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRFN3Q9BTN0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 PHGDH-210ENST00000641115 1638 ntBASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 HNRNPDP1-201ENST00000439535 754 ntBASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 AP006288.1-201ENST00000446065 395 ntBASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 IGHV3-22-201ENST00000520721 359 ntBASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRFN3Q9BTN0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 AC034105.1-201ENST00000563488 319 ntBASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 MIR1199-201ENST00000621445 119 ntBASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRFN3Q9BTN0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRFN3Q9BTN0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.14■□□□□ 0.66
LRFN3Q9BTN0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 RPS2P28-201ENST00000314255 741 ntBASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.14■□□□□ 0.65
LRFN3Q9BTN0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms