Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 AC067852.2-201ENST00000590513 2313 ntBASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 EEF1DP3-203ENST00000566025 782 ntBASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 KRT87P-202ENST00000534226 1464 ntBASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 AL161938.1-201ENST00000569833 2180 ntBASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPSNAP3BQ9BS92 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 AL162430.1-201ENST00000480705 870 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L2-201ENST00000561772 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 AC120498.10-201ENST00000621827 505 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L6-201ENST00000626483 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L1-201ENST00000627662 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L8-201ENST00000629013 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L3-201ENST00000630187 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L7-201ENST00000630678 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 DUX4L5-201ENST00000630834 1275 ntBASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NIPSNAP3BQ9BS92 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 Z98044.1-201ENST00000632503 1764 ntBASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 AC099398.1-201ENST00000567919 2776 ntBASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 POU5F1P4-201ENST00000413175 1085 ntBASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.29■□□□□ 0.04
NIPSNAP3BQ9BS92 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms